Variant report

Variant rs12069
Chromosome Location chr21:46715682-46715683
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46710200-46716000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr21:46710600-46716800 Enhancers Fetal Heart heart
3 chr21:46710800-46715800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr21:46710800-46715800 Enhancers Pancreas Pancrea
5 chr21:46710800-46715800 Enhancers Spleen Spleen
6 chr21:46711400-46719200 Weak transcription NHEK skin
7 chr21:46711600-46716800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr21:46712000-46716000 Enhancers HUVEC blood vessel
9 chr21:46712000-46716200 Enhancers Ovary ovary
10 chr21:46712000-46716400 Enhancers Fetal Muscle Leg muscle
11 chr21:46712000-46716800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
12 chr21:46712200-46715800 Enhancers Left Ventricle heart
13 chr21:46712200-46716000 Enhancers Fetal Stomach stomach
14 chr21:46712200-46716200 Enhancers Right Atrium heart
15 chr21:46712200-46716400 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr21:46712200-46717000 Enhancers NHDF-Ad bronchial
17 chr21:46712800-46715800 Bivalent Enhancer Placenta Placenta
18 chr21:46713400-46716400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr21:46713400-46717000 Weak transcription A549 lung
20 chr21:46713400-46717400 Weak transcription Liver Liver
21 chr21:46713400-46720400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr21:46713600-46715800 Enhancers HUES48 Cell Line embryonic stem cell
23 chr21:46713600-46720400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr21:46713600-46720400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr21:46713600-46721000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr21:46713600-46721800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr21:46713600-46722600 Weak transcription Primary T cells from cord blood blood
28 chr21:46713800-46716800 Enhancers Colon Smooth Muscle Colon
29 chr21:46713800-46738800 Weak transcription Gastric stomach
30 chr21:46714200-46715800 Enhancers Rectal Mucosa Donor 31 rectum
31 chr21:46714400-46715800 Enhancers K562 blood
32 chr21:46714400-46716200 Enhancers Fetal Intestine Small intestine
33 chr21:46714600-46716800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr21:46714800-46715800 Enhancers Brain Anterior Caudate brain
35 chr21:46714800-46715800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr21:46714800-46715800 Enhancers Brain Substantia Nigra brain
37 chr21:46714800-46715800 Enhancers Duodenum Mucosa Duodenum
38 chr21:46714800-46716200 Enhancers Lung lung
39 chr21:46714800-46716400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr21:46714800-46716400 Enhancers Fetal Kidney kidney
41 chr21:46714800-46720400 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr21:46715000-46715800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr21:46715000-46715800 Enhancers Duodenum Smooth Muscle Duodenum
44 chr21:46715000-46715800 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
45 chr21:46715000-46716200 Enhancers Fetal Muscle Trunk muscle
46 chr21:46715000-46722000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr21:46715200-46715800 Enhancers Adipose Nuclei Adipose
48 chr21:46715200-46715800 Enhancers Small Intestine intestine
49 chr21:46715200-46716000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr21:46715200-46716000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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