The 2.0 version of rSNPBase

Variant report

Variant rs12071769
Chromosome Location chr1:67471247-67471248
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67441600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:67445400-67483800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:67448800-67484200 Weak transcription Brain Cingulate Gyrus brain
4 chr1:67449400-67501800 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:67449800-67475600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:67450600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:67451200-67506200 Weak transcription Hela-S3 cervix
8 chr1:67453200-67473200 Weak transcription Colonic Mucosa Colon
9 chr1:67453200-67484000 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:67454800-67483200 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr1:67454800-67484200 Weak transcription NHDF-Ad bronchial
12 chr1:67455000-67484000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr1:67455000-67484200 Weak transcription GM12878-XiMat blood
14 chr1:67455200-67495000 Weak transcription Small Intestine intestine
15 chr1:67455400-67509400 Weak transcription Spleen Spleen
16 chr1:67455600-67484200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:67455800-67478200 Strong transcription Liver Liver
18 chr1:67455800-67485600 Weak transcription HMEC breast
19 chr1:67456200-67475600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:67456400-67484800 Weak transcription HUVEC blood vessel
21 chr1:67460000-67485200 Weak transcription Esophagus oesophagus
22 chr1:67461200-67478600 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr1:67461600-67479200 Strong transcription Fetal Intestine Large intestine
24 chr1:67462000-67474200 Strong transcription Fetal Muscle Trunk muscle
25 chr1:67462000-67478400 Strong transcription Fetal Thymus thymus
26 chr1:67462000-67480400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:67462200-67484400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:67462400-67484200 Weak transcription Ovary ovary
29 chr1:67462400-67508400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:67462600-67479400 Weak transcription NHEK skin
31 chr1:67463800-67476400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:67463800-67478000 Strong transcription Duodenum Mucosa Duodenum
33 chr1:67464200-67471600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:67464200-67478000 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr1:67464200-67478800 Strong transcription Primary B cells from cord blood blood
36 chr1:67465000-67472400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:67465000-67484200 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr1:67465200-67502400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr1:67465200-67506400 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:67465600-67472200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:67465600-67474200 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:67466200-67476000 Strong transcription Dnd41 blood
43 chr1:67466200-67478600 Strong transcription Primary T cells from cord blood blood
44 chr1:67466800-67484200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr1:67467200-67474200 Weak transcription Placenta Placenta
46 chr1:67467400-67476200 Strong transcription Primary B cells from peripheral blood blood
47 chr1:67468000-67472000 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr1:67468000-67473400 Weak transcription Fetal Kidney kidney
49 chr1:67468000-67478600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:67468000-67484400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015