The 2.0 version of rSNPBase

Variant report

Variant rs12090722
Chromosome Location chr1:211806541-211806542
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211800000-211807200 Enhancers Fetal Heart heart
2 chr1:211803400-211807000 Enhancers Ovary ovary
3 chr1:211803400-211807600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:211803400-211807600 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr1:211803600-211807200 Enhancers Fetal Muscle Trunk muscle
6 chr1:211803600-211807200 Enhancers Fetal Muscle Leg muscle
7 chr1:211803800-211807600 Enhancers Fetal Thymus thymus
8 chr1:211804000-211806800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:211804200-211807200 Enhancers Right Atrium heart
10 chr1:211804200-211807200 Enhancers Right Ventricle heart
11 chr1:211804200-211807600 Enhancers Left Ventricle heart
12 chr1:211804200-211813400 Weak transcription H1 Cell Line embryonic stem cell
13 chr1:211804200-211816600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:211804400-211807400 Enhancers Spleen Spleen
15 chr1:211804400-211809400 Enhancers Hela-S3 cervix
16 chr1:211805000-211807000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:211805200-211806600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr1:211805400-211806800 Enhancers GM12878-XiMat blood
19 chr1:211805400-211807000 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:211805400-211807000 Enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr1:211805400-211807000 Enhancers Colon Smooth Muscle Colon
22 chr1:211805400-211807400 Enhancers Osteobl bone
23 chr1:211805400-211808200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:211805400-211808200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:211805600-211806600 Enhancers Brain Anterior Caudate brain
26 chr1:211805600-211807000 Enhancers Esophagus oesophagus
27 chr1:211805600-211807000 Enhancers Fetal Lung lung
28 chr1:211805600-211807200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:211805600-211807200 Enhancers HSMM muscle
30 chr1:211805600-211807400 Enhancers NH-A brain
31 chr1:211805600-211807800 Enhancers HMEC breast
32 chr1:211805800-211806800 Bivalent Enhancer Fetal Stomach stomach
33 chr1:211805800-211807000 Enhancers Placenta Placenta
34 chr1:211805800-211807000 Enhancers Lung lung
35 chr1:211805800-211807000 Enhancers Stomach Smooth Muscle stomach
36 chr1:211805800-211807200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:211805800-211807200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:211805800-211807200 Enhancers Muscle Satellite Cultured Cells --
39 chr1:211805800-211807200 Enhancers Rectal Smooth Muscle rectum
40 chr1:211805800-211807200 Enhancers Skeletal Muscle Male skeletal muscle
41 chr1:211805800-211807200 Enhancers Skeletal Muscle Female skeletal muscle
42 chr1:211805800-211807200 Enhancers NHEK skin
43 chr1:211805800-211807400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:211805800-211807600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:211805800-211807600 Enhancers Pancreas Pancrea
46 chr1:211805800-211807600 Enhancers HSMMtube muscle
47 chr1:211805800-211808200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:211806000-211807000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:211806000-211807000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:211806000-211807000 Enhancers Adipose Nuclei Adipose

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Last update: Aug 31, 2015