The 2.0 version of rSNPBase

Variant report

Variant rs12090768
Chromosome Location chr1:67440483-67440484
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67396800-67458200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:67396800-67459000 Weak transcription Esophagus oesophagus
3 chr1:67397600-67457600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:67400600-67466600 Weak transcription Aorta Aorta
5 chr1:67405600-67445400 Strong transcription Fetal Thymus thymus
6 chr1:67406400-67455600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:67407000-67445400 Strong transcription Dnd41 blood
8 chr1:67408200-67448000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:67408200-67450200 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:67409400-67446400 Weak transcription Brain Angular Gyrus brain
11 chr1:67409400-67447600 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:67410600-67446400 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr1:67410600-67453200 Strong transcription iPS-20b Cell Line embryonic stem cell
14 chr1:67411000-67455000 Strong transcription HUES64 Cell Line embryonic stem cell
15 chr1:67411200-67454800 Strong transcription HUES6 Cell Line embryonic stem cell
16 chr1:67411200-67456200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:67412800-67440600 Weak transcription Psoas Muscle Psoas
18 chr1:67413400-67447000 Strong transcription Primary monocytes fromperipheralblood blood
19 chr1:67413400-67456400 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr1:67413600-67446400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:67414600-67462000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:67416600-67446400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:67417000-67462000 Weak transcription Right Ventricle heart
24 chr1:67417400-67446200 Strong transcription HSMM muscle
25 chr1:67418000-67446400 Strong transcription Osteobl bone
26 chr1:67418200-67447000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:67418600-67442800 Weak transcription Spleen Spleen
28 chr1:67420200-67444200 Weak transcription Fetal Heart heart
29 chr1:67420600-67467000 Weak transcription Gastric stomach
30 chr1:67420800-67446200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:67420800-67446600 Weak transcription Stomach Mucosa stomach
32 chr1:67421000-67441400 Strong transcription Adipose Nuclei Adipose
33 chr1:67426800-67446000 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr1:67427200-67455200 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr1:67427400-67446000 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr1:67427400-67446400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:67427600-67446000 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr1:67428200-67445000 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:67428800-67442000 Weak transcription HepG2 liver
40 chr1:67429600-67442600 Weak transcription Brain Substantia Nigra brain
41 chr1:67430600-67446000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:67430600-67459000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:67431600-67440600 Weak transcription H9 Cell Line embryonic stem cell
44 chr1:67431800-67440800 Weak transcription HSMMtube muscle
45 chr1:67431800-67443000 Weak transcription Brain Cingulate Gyrus brain
46 chr1:67431800-67446400 Strong transcription Primary T cells fromperipheralblood blood
47 chr1:67431800-67446400 Weak transcription Small Intestine intestine
48 chr1:67431800-67448200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:67432000-67440600 Weak transcription Fetal Muscle Trunk muscle
50 chr1:67432000-67440800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015