The 2.0 version of rSNPBase

Variant report

Variant rs12092371
Chromosome Location chr1:85002685-85002686
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84973000-85003200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:84973200-85003200 Weak transcription Adipose Nuclei Adipose
3 chr1:84975200-85019600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:84975800-85030200 Weak transcription Fetal Intestine Small intestine
5 chr1:84981600-85012200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:84982400-85026800 Weak transcription Primary hematopoietic stem cells blood
7 chr1:84987000-85003200 Weak transcription Left Ventricle heart
8 chr1:84988200-85020600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:84991000-85034200 Weak transcription Esophagus oesophagus
10 chr1:84991000-85038200 Weak transcription Thymus Thymus
11 chr1:84991800-85026800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr1:84992000-85003200 Weak transcription GM12878-XiMat blood
13 chr1:84992000-85003400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:84992200-85003000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:84992200-85026000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:84992400-85019400 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr1:84992400-85038800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:84992600-85005600 Weak transcription Osteobl bone
19 chr1:84992600-85021200 Weak transcription NHDF-Ad bronchial
20 chr1:84993200-85025000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:84993400-85025800 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:84993400-85027000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:84993600-85026800 Weak transcription HSMM muscle
24 chr1:84994000-85026600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:84994600-85003000 Weak transcription Primary B cells from cord blood blood
26 chr1:84994600-85003400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:84994600-85003400 Weak transcription Liver Liver
28 chr1:84994600-85008000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:84994800-85008600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:84995000-85028600 Weak transcription Fetal Intestine Large intestine
31 chr1:84995400-85020600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr1:84998400-85003000 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:84998600-85003200 Weak transcription Primary monocytes fromperipheralblood blood
34 chr1:84998600-85038800 Weak transcription Right Ventricle heart
35 chr1:84999800-85008800 Weak transcription HUVEC blood vessel
36 chr1:85000800-85027400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:85001400-85036400 Weak transcription NH-A brain
38 chr1:85001600-85003400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:85001600-85033600 Weak transcription NHLF lung
40 chr1:85001800-85002800 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:85001800-85005400 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:85001800-85021400 Weak transcription Primary B cells from peripheral blood blood
43 chr1:85001800-85026600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:85001800-85028600 Weak transcription Fetal Thymus thymus
45 chr1:85002000-85003200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:85002000-85005000 Strong transcription Primary T cells from cord blood blood
47 chr1:85002000-85038400 Weak transcription Aorta Aorta
48 chr1:85002200-85006600 Weak transcription Rectal Smooth Muscle rectum
49 chr1:85002200-85027600 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:85002200-85034200 Weak transcription Lung lung

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Last update: Aug 31, 2015