The 2.0 version of rSNPBase

Variant report

Variant rs12095163
Chromosome Location chr1:220993265-220993266
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr1:220973400-221000200 Weak transcription Placenta Placenta
3 chr1:220980400-221001400 Weak transcription Gastric stomach
4 chr1:220984000-220997400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:220984000-220999800 Weak transcription Colonic Mucosa Colon
6 chr1:220984200-220993400 Strong transcription Primary monocytes fromperipheralblood blood
7 chr1:220984200-221001400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:220984600-220999600 Weak transcription Left Ventricle heart
9 chr1:220984600-221006600 Weak transcription Psoas Muscle Psoas
10 chr1:220987400-220997000 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:220987600-221003800 Weak transcription HepG2 liver
12 chr1:220989800-220997800 Weak transcription Spleen Spleen
13 chr1:220989800-221000800 Weak transcription Fetal Intestine Large intestine
14 chr1:220990000-221001200 Weak transcription Hela-S3 cervix
15 chr1:220990200-220998000 Weak transcription Aorta Aorta
16 chr1:220990400-220993400 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:220991000-220993600 Enhancers Rectal Smooth Muscle rectum
18 chr1:220991000-220993800 Enhancers Fetal Stomach stomach
19 chr1:220991000-220997400 Weak transcription Liver Liver
20 chr1:220991200-220993400 Enhancers Fetal Lung lung
21 chr1:220991200-220993600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:220991400-220993400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:220991400-220993400 Enhancers NHLF lung
24 chr1:220991400-220993600 Enhancers NHDF-Ad bronchial
25 chr1:220991600-220993400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:220991600-220993400 Enhancers Muscle Satellite Cultured Cells --
27 chr1:220991600-220993600 Enhancers HSMMtube muscle
28 chr1:220991600-220995600 Strong transcription Primary neutrophils fromperipheralblood blood
29 chr1:220991600-221000800 Weak transcription Fetal Intestine Small intestine
30 chr1:220991800-220993400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:220992000-220997600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:220992000-220999200 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:220992000-221002600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:220992200-220993600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:220992400-220993400 Enhancers Osteobl bone
36 chr1:220992800-221001200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr1:220993000-220993600 Enhancers Colon Smooth Muscle Colon
38 chr1:220993000-220996800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:220993200-220994200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:220993200-220999200 Weak transcription Adipose Nuclei Adipose
41 chr1:220993200-221000800 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:220993200-221001000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015