The 2.0 version of rSNPBase

Variant report

Variant rs12097737
Chromosome Location chr1:225604648-225604649
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225582200-225610400 Strong transcription Fetal Thymus thymus
2 chr1:225584200-225610600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:225584800-225609800 Strong transcription Dnd41 blood
4 chr1:225584800-225610400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:225585000-225609800 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr1:225585000-225609800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:225585000-225609800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:225585000-225610400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:225585200-225609800 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr1:225585800-225610000 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:225585800-225610000 Strong transcription K562 blood
12 chr1:225585800-225610400 Strong transcription Primary T cells fromperipheralblood blood
13 chr1:225586000-225607000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:225587600-225607000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:225587600-225607800 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr1:225587800-225610000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:225588200-225605400 Strong transcription Rectal Mucosa Donor 29 rectum
18 chr1:225588200-225608200 Strong transcription Primary T helper naive cells fromperipheralblood blood
19 chr1:225588200-225610200 Strong transcription Osteobl bone
20 chr1:225588600-225608400 Strong transcription Hela-S3 cervix
21 chr1:225588600-225609800 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr1:225589000-225607400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:225590200-225610000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:225590600-225607200 Strong transcription Primary T cells from cord blood blood
25 chr1:225590600-225607400 Strong transcription Thymus Thymus
26 chr1:225590600-225607800 Strong transcription Fetal Muscle Leg muscle
27 chr1:225590600-225608400 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr1:225590800-225608200 Strong transcription Fetal Muscle Trunk muscle
29 chr1:225591800-225608200 Strong transcription Brain Germinal Matrix brain
30 chr1:225592800-225607400 Strong transcription Primary hematopoietic stem cells blood
31 chr1:225593000-225610800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:225594600-225607200 Strong transcription NHEK skin
33 chr1:225595400-225610400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:225595600-225607600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:225595800-225608400 Strong transcription Fetal Brain Female brain
36 chr1:225596200-225607600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:225596800-225607000 Strong transcription Muscle Satellite Cultured Cells --
38 chr1:225596800-225607600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:225596800-225610600 Strong transcription HSMM muscle
40 chr1:225597000-225607200 Strong transcription Primary T helper naive cells from peripheral blood blood
41 chr1:225597400-225607600 Strong transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:225597400-225608600 Strong transcription iPS-18 Cell Line embryonic stem cell
43 chr1:225597400-225608600 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr1:225597600-225607000 Strong transcription Left Ventricle heart
45 chr1:225597600-225607200 Strong transcription Adipose Nuclei Adipose
46 chr1:225597600-225609000 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr1:225597600-225609000 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr1:225597600-225611200 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr1:225597800-225604800 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr1:225597800-225607600 Strong transcription Placenta Placenta

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Last update: Aug 31, 2015