Variant report

Variant rs12110779
Chromosome Location chr6:24874322-24874323
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24843800-24879400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:24847000-24876600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:24855200-24895000 Genic enhancers Primary T helper cells fromperipheralblood blood
4 chr6:24856200-24876400 Weak transcription Rectal Smooth Muscle rectum
5 chr6:24856200-24882400 Weak transcription NHLF lung
6 chr6:24856400-24877200 Weak transcription Stomach Smooth Muscle stomach
7 chr6:24858600-24876000 Weak transcription Right Ventricle heart
8 chr6:24858800-24876600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr6:24859200-24877000 Weak transcription Gastric stomach
10 chr6:24859200-24877000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr6:24859200-24877200 Weak transcription Lung lung
12 chr6:24859400-24874800 Weak transcription Adipose Nuclei Adipose
13 chr6:24859400-24886800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr6:24860400-24876600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:24861200-24877000 Weak transcription Psoas Muscle Psoas
16 chr6:24861400-24876800 Strong transcription Primary monocytes fromperipheralblood blood
17 chr6:24861600-24875400 Weak transcription Duodenum Mucosa Duodenum
18 chr6:24861600-24877000 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr6:24862800-24876000 Strong transcription Primary neutrophils fromperipheralblood blood
20 chr6:24862800-24877000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr6:24862800-24885600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
22 chr6:24862800-24887400 Genic enhancers Primary T helper cells PMA-I stimulated --
23 chr6:24863000-24876600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:24863800-24875800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr6:24863800-24876400 Strong transcription Fetal Thymus thymus
26 chr6:24864000-24877200 Weak transcription Fetal Stomach stomach
27 chr6:24864400-24877000 Strong transcription Primary hematopoietic stem cells blood
28 chr6:24865600-24876000 Weak transcription Left Ventricle heart
29 chr6:24865600-24877000 Strong transcription Primary B cells from cord blood blood
30 chr6:24865600-24879600 Weak transcription Brain Germinal Matrix brain
31 chr6:24865800-24877000 Weak transcription Liver Liver
32 chr6:24867600-24876200 Strong transcription GM12878-XiMat blood
33 chr6:24868800-24874600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:24869000-24878000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:24869400-24875400 Strong transcription Primary B cells from peripheral blood blood
36 chr6:24869400-24876800 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr6:24870000-24875400 Strong transcription NHDF-Ad bronchial
38 chr6:24870200-24874400 Genic enhancers Primary T cells from cord blood blood
39 chr6:24870400-24875200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:24870400-24878200 Genic enhancers Primary T killer memory cells from peripheral blood blood
41 chr6:24870400-24883800 Genic enhancers Primary T helper naive cells from peripheral blood blood
42 chr6:24870800-24874800 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr6:24870800-24876200 Strong transcription HSMMtube muscle
44 chr6:24870800-24876600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:24870800-24877000 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr6:24870800-24877200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr6:24871400-24876600 Strong transcription Thymus Thymus
48 chr6:24871800-24876000 Strong transcription Spleen Spleen
49 chr6:24871800-24886800 Weak transcription Brain Cingulate Gyrus brain
50 chr6:24872000-24874800 Strong transcription Brain Anterior Caudate brain

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