Variant report

Variant	rs12112780
Chromosome Location	chr7:103782091-103782092
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10487188	0.89[AFR][1000 genomes]
rs10487189	0.91[AFR][1000 genomes]
rs17133236	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17159469	0.94[AFR][1000 genomes]
rs17159574	0.94[AFR][1000 genomes]
rs17159582	0.94[AFR][1000 genomes]
rs17159699	0.83[AFR][1000 genomes]
rs17159721	0.91[AFR][1000 genomes]
rs17159937	0.82[AFR][1000 genomes]
rs2307401	0.91[AFR][1000 genomes]
rs57996204	0.89[AFR][1000 genomes]
rs7781770	0.89[AFR][1000 genomes]
rs7794585	0.89[AFR][1000 genomes]
rs7801202	0.89[AFR][1000 genomes]
rs7811249	0.89[AFR][1000 genomes]

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103763800-103815000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr7:103764000-103783200	Weak transcription	NHLF	lung
3	chr7:103764000-103829800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr7:103764400-103820200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr7:103765600-103815000	Weak transcription	Brain Angular Gyrus	brain
6	chr7:103765600-103840200	Weak transcription	Small Intestine	intestine
7	chr7:103766200-103800000	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr7:103766200-103803800	Weak transcription	Pancreas	Pancrea
9	chr7:103766200-103816000	Weak transcription	Brain Substantia Nigra	brain
10	chr7:103766200-103823600	Weak transcription	Esophagus	oesophagus
11	chr7:103766200-103838400	Weak transcription	Spleen	Spleen
12	chr7:103766400-103822600	Weak transcription	Colon Smooth Muscle	Colon
13	chr7:103767200-103829200	Weak transcription	Gastric	stomach
14	chr7:103767200-103843600	Weak transcription	Right Ventricle	heart
15	chr7:103767600-103820200	Weak transcription	Brain Germinal Matrix	brain
16	chr7:103769200-103822600	Weak transcription	Fetal Kidney	kidney
17	chr7:103771800-103800000	Weak transcription	HSMM	muscle
18	chr7:103771800-103804400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
19	chr7:103771800-103807200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr7:103771800-103820000	Weak transcription	NHEK	skin
21	chr7:103772200-103792000	Weak transcription	Aorta	Aorta
22	chr7:103773200-103822800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
23	chr7:103773400-103782600	Weak transcription	HUVEC	blood vessel
24	chr7:103774600-103803600	Weak transcription	Ovary	ovary
25	chr7:103774800-103802800	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr7:103775200-103829200	Weak transcription	Lung	lung
27	chr7:103775400-103803400	Weak transcription	Left Ventricle	heart
28	chr7:103775800-103803800	Weak transcription	Primary hematopoietic stem cells	blood
29	chr7:103776800-103803800	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr7:103776800-103820200	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr7:103776800-103822800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
32	chr7:103777000-103799800	Weak transcription	K562	blood
33	chr7:103777000-103803000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
34	chr7:103777000-103803800	Weak transcription	Brain Hippocampus Middle	brain
35	chr7:103777000-103804600	Weak transcription	Colonic Mucosa	Colon
36	chr7:103777000-103804800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
37	chr7:103777000-103805200	Weak transcription	Placenta	Placenta
38	chr7:103777000-103819600	Weak transcription	Fetal Brain Female	brain
39	chr7:103777200-103805000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
40	chr7:103777200-103819400	Weak transcription	GM12878-XiMat	blood
41	chr7:103777400-103782200	Weak transcription	HUES48 Cell Line	embryonic stem cell
42	chr7:103777400-103801600	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr7:103777400-103803400	Weak transcription	HUES6 Cell Line	embryonic stem cell
44	chr7:103777400-103805000	Weak transcription	HMEC	breast
45	chr7:103777400-103819800	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr7:103777600-103785400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr7:103777600-103790400	Weak transcription	Fetal Lung	lung
48	chr7:103778000-103782600	Weak transcription	Right Atrium	heart
49	chr7:103778200-103793400	Weak transcription	Duodenum Mucosa	Duodenum
50	chr7:103778200-103793600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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