Variant report

Variant	rs12116684
Chromosome Location	chr1:165360984-165360985
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12143294	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17429123	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55845173	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55901710	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56362364	0.80[EUR][1000 genomes]
rs72687750	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165353600-165362400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:165353600-165362400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr1:165356600-165362200	Weak transcription	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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