Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10737694	0.80[AMR][1000 genomes]
rs10737695	0.89[AMR][1000 genomes]
rs10754232	0.84[AMR][1000 genomes]
rs10801624	0.87[AMR][1000 genomes]
rs12117045	0.94[JPT][hapmap];0.82[TSI][hapmap];0.84[YRI][hapmap]
rs12120352	0.91[AMR][1000 genomes]
rs12123169	0.88[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs12134279	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12141007	0.90[AMR][1000 genomes]
rs12354257	0.83[CHD][hapmap];0.94[JPT][hapmap]
rs12408939	0.91[AMR][1000 genomes]
rs12727812	0.90[AMR][1000 genomes]
rs1539414	0.82[CEU][hapmap];0.90[CHD][hapmap];0.94[JPT][hapmap];0.84[TSI][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16841904	0.87[CHD][hapmap];0.94[JPT][hapmap];0.82[TSI][hapmap]
rs16841912	0.93[JPT][hapmap]
rs17641524	0.84[GIH][hapmap]
rs17642632	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1775452	0.93[JPT][hapmap]
rs2221134	0.89[AMR][1000 genomes]
rs2477077	0.94[JPT][hapmap]
rs2488389	0.83[CHD][hapmap];0.94[JPT][hapmap];0.82[TSI][hapmap]
rs2488393	0.94[JPT][hapmap]
rs2488397	0.94[JPT][hapmap]
rs2488398	0.85[JPT][hapmap]
rs2488401	0.90[CHD][hapmap];0.94[JPT][hapmap];0.82[TSI][hapmap]
rs35207123	0.80[AMR][1000 genomes]
rs3900909	0.86[ASN][1000 genomes]
rs4512677	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4915567	0.87[ASN][1000 genomes]
rs6678151	0.89[AMR][1000 genomes]
rs6692930	0.89[AMR][1000 genomes]
rs904576	0.89[AMR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12121863	RGS21	cis	parietal	SCAN
rs12121863	PTPRC	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197782600-197785600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr1:197784000-197785600	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr1:197784600-197785600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell

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