Variant report

Variant	rs12123258
Chromosome Location	chr1:215160498-215160499
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12123237	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12402694	0.82[AFR][1000 genomes]
rs12403837	0.90[AFR][1000 genomes]
rs12406318	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1349671	1.00[CEU][hapmap]
rs17023977	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs59084003	0.80[AFR][1000 genomes]
rs6691805	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7531398	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs755576	0.87[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215141800-215162600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:215157000-215162400	Weak transcription	NHDF-Ad	bronchial
3	chr1:215158400-215162800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:215158600-215162600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr1:215158600-215162800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr1:215160400-215162200	Weak transcription	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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