The 2.0 version of rSNPBase

Variant report

Variant rs12127274
Chromosome Location chr1:214700474-214700475
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214665400-214705400 Weak transcription Right Ventricle heart
2 chr1:214688400-214706200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:214688400-214710600 Weak transcription Spleen Spleen
4 chr1:214690600-214705600 Weak transcription Ovary ovary
5 chr1:214690600-214705600 Weak transcription Pancreas Pancrea
6 chr1:214691400-214705600 Weak transcription Placenta Placenta
7 chr1:214692400-214710600 Weak transcription HUVEC blood vessel
8 chr1:214693000-214701000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:214694400-214706400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:214694600-214705400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:214696200-214701000 Weak transcription Fetal Heart heart
12 chr1:214696400-214700800 Enhancers Psoas Muscle Psoas
13 chr1:214697000-214701200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:214697200-214701400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:214697400-214702400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:214697600-214701200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:214697600-214701200 Enhancers NH-A brain
18 chr1:214697800-214701400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:214697800-214706000 Weak transcription Lung lung
20 chr1:214698000-214700600 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:214698000-214704800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:214698400-214700800 Enhancers ES-WA7 Cell Line embryonic stem cell
23 chr1:214698400-214701400 Enhancers NHDF-Ad bronchial
24 chr1:214698800-214701200 Enhancers HUES48 Cell Line embryonic stem cell
25 chr1:214698800-214710800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:214699000-214701000 Weak transcription Fetal Lung lung
27 chr1:214699000-214705400 Weak transcription Fetal Intestine Small intestine
28 chr1:214699200-214700800 Enhancers Skeletal Muscle Male skeletal muscle
29 chr1:214699200-214700800 Enhancers NHEK skin
30 chr1:214699200-214701000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:214699200-214701200 Enhancers Skeletal Muscle Female skeletal muscle
32 chr1:214699200-214702400 Weak transcription Primary T cells from cord blood blood
33 chr1:214699200-214702600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr1:214699200-214702600 Enhancers Osteobl bone
35 chr1:214699200-214704600 Weak transcription Rectal Smooth Muscle rectum
36 chr1:214699200-214705600 Weak transcription Gastric stomach
37 chr1:214699200-214706200 Weak transcription H1 Cell Line embryonic stem cell
38 chr1:214699200-214706200 Weak transcription Esophagus oesophagus
39 chr1:214699200-214711400 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr1:214699200-214711600 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:214699400-214700600 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr1:214699400-214700600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:214699400-214700600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:214699400-214702600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr1:214699400-214704600 Weak transcription Fetal Kidney kidney
48 chr1:214699400-214704800 Weak transcription Fetal Muscle Leg muscle
49 chr1:214699400-214705400 Weak transcription Fetal Stomach stomach
50 chr1:214699400-214706000 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015