The 2.0 version of rSNPBase

Variant report

Variant rs12134957
Chromosome Location chr1:151045419-151045420
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151043600-151048200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:151043600-151048800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:151043600-151049600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:151043600-151050200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:151043800-151047200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:151043800-151056200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:151044000-151046400 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr1:151044000-151046400 Weak transcription NH-A brain
9 chr1:151044000-151047000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:151044000-151047400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:151044000-151048800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:151044000-151062800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:151044000-151066800 Weak transcription Ovary ovary
14 chr1:151044000-151079600 Weak transcription Spleen Spleen
15 chr1:151044000-151080600 Weak transcription Esophagus oesophagus
16 chr1:151044200-151045600 Enhancers HepG2 liver
17 chr1:151044200-151046000 Enhancers Primary T cells fromperipheralblood blood
18 chr1:151044200-151047600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:151044200-151049200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:151044200-151069800 Weak transcription HSMM muscle
21 chr1:151044200-151070800 Weak transcription Fetal Lung lung
22 chr1:151044200-151080200 Weak transcription Aorta Aorta
23 chr1:151044400-151045600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:151044400-151045600 Weak transcription Fetal Muscle Leg muscle
25 chr1:151044400-151045600 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:151044400-151046600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:151044400-151047000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:151044400-151047000 Weak transcription HMEC breast
29 chr1:151044400-151047200 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:151044400-151048400 Weak transcription HUVEC blood vessel
31 chr1:151044400-151061600 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:151044400-151062200 Weak transcription Liver Liver
33 chr1:151044400-151079000 Weak transcription Left Ventricle heart
34 chr1:151044400-151079600 Weak transcription Lung lung
35 chr1:151044400-151090200 Weak transcription Gastric stomach
36 chr1:151044400-151090400 Weak transcription Right Ventricle heart
37 chr1:151044400-151103600 Weak transcription Small Intestine intestine
38 chr1:151044600-151045600 Weak transcription Primary T cells from cord blood blood
39 chr1:151044600-151045800 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr1:151044600-151045800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:151044600-151045800 Weak transcription Stomach Smooth Muscle stomach
42 chr1:151044600-151046400 Weak transcription Fetal Intestine Large intestine
43 chr1:151044600-151046800 Weak transcription Thymus Thymus
44 chr1:151044600-151047000 Weak transcription Rectal Smooth Muscle rectum
45 chr1:151044600-151047000 Weak transcription NHDF-Ad bronchial
46 chr1:151044600-151047200 Weak transcription Fetal Brain Male brain
47 chr1:151044600-151047600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:151044600-151048400 Weak transcription Primary monocytes fromperipheralblood blood
49 chr1:151044600-151049800 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr1:151044600-151052000 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015