Variant report

Variant rs12136630
Chromosome Location chr1:171833688-171833689
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171827600-171837200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:171828400-171850800 Weak transcription H1 Cell Line embryonic stem cell
3 chr1:171830200-171837200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:171830400-171837200 Weak transcription HMEC breast
5 chr1:171832400-171833800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
6 chr1:171832400-171833800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:171832600-171833800 Enhancers Brain Hippocampus Middle brain
8 chr1:171832800-171833800 Enhancers Brain Angular Gyrus brain
9 chr1:171832800-171833800 Enhancers Brain Cingulate Gyrus brain
10 chr1:171832800-171833800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
11 chr1:171832800-171833800 Enhancers Brain Substantia Nigra brain
12 chr1:171833000-171837400 Weak transcription Gastric stomach
13 chr1:171833200-171833800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:171833200-171838200 Weak transcription NHEK skin
15 chr1:171833400-171833800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:171833400-171834400 Weak transcription Brain Germinal Matrix brain
17 chr1:171833600-171834400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:171833600-171837400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:171833600-171837600 Weak transcription Brain Anterior Caudate brain

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