Variant report

Variant	rs1213964
Chromosome Location	chr2:124796427-124796428
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1213973	1.00[ASN][1000 genomes]
rs2579823	1.00[ASN][1000 genomes]
rs2699380	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124792600-124797000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr2:124796200-124797200	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr2:124796400-124797000	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr2:124796400-124797000	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr2:124796400-124797000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr2:124796400-124797200	Enhancers	H1 Cell Line	embryonic stem cell
7	chr2:124796400-124797200	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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