Variant report

Variant rs12141623
Chromosome Location chr1:62647682-62647683
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62636200-62649000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:62638200-62649000 Weak transcription Fetal Intestine Small intestine
3 chr1:62640600-62651200 Enhancers H1 Cell Line embryonic stem cell
4 chr1:62645000-62649000 Weak transcription Colonic Mucosa Colon
5 chr1:62645600-62649400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:62645800-62648200 Enhancers H9 Cell Line embryonic stem cell
7 chr1:62646000-62648200 Enhancers Fetal Muscle Leg muscle
8 chr1:62646000-62649400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:62646200-62649000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:62646400-62648800 Weak transcription Fetal Lung lung
11 chr1:62646400-62649000 Weak transcription Fetal Kidney kidney
12 chr1:62646600-62660400 Weak transcription Right Atrium heart
13 chr1:62646800-62649600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:62647000-62647800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
15 chr1:62647000-62648200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
16 chr1:62647000-62649200 Enhancers Rectal Mucosa Donor 31 rectum
17 chr1:62647200-62647800 Enhancers Placenta Amnion Placenta Amnion
18 chr1:62647400-62647800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:62647400-62648400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:62647400-62648400 Weak transcription Fetal Muscle Trunk muscle
21 chr1:62647400-62648600 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr1:62647400-62649400 Enhancers Fetal Brain Female brain
23 chr1:62647400-62649600 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr1:62647600-62647800 Active TSS HUES48 Cell Line embryonic stem cell
25 chr1:62647600-62647800 Active TSS iPS-20b Cell Line embryonic stem cell
26 chr1:62647600-62648400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
27 chr1:62647600-62649000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:62647600-62649000 Weak transcription Placenta Placenta
29 chr1:62647600-62649800 Enhancers HUES6 Cell Line embryonic stem cell

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