The 2.0 version of rSNPBase

Variant report

Variant rs12143786
Chromosome Location chr1:145676210-145676211
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145634800-145682600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:145642400-145682600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:145649000-145682800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:145649200-145682400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr1:145649600-145686600 Weak transcription Small Intestine intestine
6 chr1:145653000-145713400 Weak transcription Pancreas Pancrea
7 chr1:145654200-145683000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:145654200-145687800 Weak transcription Hela-S3 cervix
9 chr1:145654400-145681800 Weak transcription Psoas Muscle Psoas
10 chr1:145657800-145682800 Weak transcription Colon Smooth Muscle Colon
11 chr1:145657800-145695000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:145659400-145691600 Weak transcription Esophagus oesophagus
13 chr1:145660600-145682600 Weak transcription HMEC breast
14 chr1:145661200-145683400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr1:145661200-145686200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr1:145663000-145679200 Weak transcription NHEK skin
17 chr1:145664200-145687800 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:145664400-145681800 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:145664600-145676600 Weak transcription Brain Hippocampus Middle brain
20 chr1:145664600-145682400 Weak transcription Brain Anterior Caudate brain
21 chr1:145664600-145683600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:145665200-145676400 Weak transcription NHDF-Ad bronchial
23 chr1:145665600-145682800 Weak transcription Fetal Lung lung
24 chr1:145667000-145677200 Weak transcription Aorta Aorta
25 chr1:145667000-145682600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:145667400-145683400 Weak transcription Gastric stomach
27 chr1:145669600-145682600 Weak transcription NH-A brain
28 chr1:145671600-145693600 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr1:145671800-145693800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:145672200-145683400 Weak transcription Fetal Kidney kidney
31 chr1:145672600-145676600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:145672600-145677600 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:145672600-145679800 Strong transcription Primary T cells fromperipheralblood blood
34 chr1:145672800-145693800 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:145673000-145678400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:145673200-145676400 Weak transcription Brain Cingulate Gyrus brain
37 chr1:145673200-145679600 Strong transcription Primary T cells from cord blood blood
38 chr1:145673200-145681800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:145673200-145686400 Weak transcription K562 blood
40 chr1:145673400-145676600 Weak transcription Brain Angular Gyrus brain
41 chr1:145673400-145682600 Weak transcription Brain Substantia Nigra brain
42 chr1:145673400-145683000 Weak transcription HepG2 liver
43 chr1:145673400-145683400 Weak transcription Ovary ovary
44 chr1:145673400-145693400 Weak transcription Stomach Mucosa stomach
45 chr1:145673600-145676400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:145673600-145676400 Weak transcription GM12878-XiMat blood
47 chr1:145673600-145683400 Weak transcription Lung lung
48 chr1:145673600-145685200 Weak transcription A549 lung
49 chr1:145673600-145687600 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr1:145673600-145700800 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015