The 2.0 version of rSNPBase

Variant report

Variant rs12145098
Chromosome Location chr1:151655627-151655628
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151588200-151665200 Weak transcription Aorta Aorta
2 chr1:151591200-151675400 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:151603000-151663200 Weak transcription Colonic Mucosa Colon
4 chr1:151610600-151665000 Weak transcription Lung lung
5 chr1:151611600-151668200 Weak transcription Gastric stomach
6 chr1:151618000-151667600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:151626800-151665400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:151627200-151659800 Weak transcription Spleen Spleen
9 chr1:151627200-151670600 Weak transcription Small Intestine intestine
10 chr1:151627400-151676000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:151628200-151669800 Weak transcription Esophagus oesophagus
12 chr1:151632200-151665000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:151632200-151667400 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:151632400-151664400 Weak transcription Thymus Thymus
15 chr1:151634600-151657600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:151638600-151675600 Weak transcription Psoas Muscle Psoas
17 chr1:151642000-151665000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:151642200-151659600 Weak transcription HepG2 liver
19 chr1:151642200-151665000 Weak transcription K562 blood
20 chr1:151642800-151656600 Weak transcription Fetal Kidney kidney
21 chr1:151642800-151665000 Weak transcription Fetal Brain Female brain
22 chr1:151643000-151665000 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:151643200-151659000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:151643600-151665000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:151643800-151655800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:151643800-151669800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:151644000-151664600 Weak transcription Fetal Thymus thymus
28 chr1:151644000-151665000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:151644000-151665000 Weak transcription Brain Angular Gyrus brain
30 chr1:151644000-151665000 Weak transcription Pancreas Pancrea
31 chr1:151644200-151664400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:151644200-151665000 Weak transcription Brain Cingulate Gyrus brain
33 chr1:151644200-151665000 Weak transcription Ovary ovary
34 chr1:151644200-151665200 Weak transcription Brain Substantia Nigra brain
35 chr1:151644400-151665000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:151644600-151657800 Weak transcription Brain Anterior Caudate brain
37 chr1:151644800-151665200 Weak transcription Brain Hippocampus Middle brain
38 chr1:151646600-151665800 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:151647600-151656800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:151647800-151660000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:151649000-151662000 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr1:151650600-151663400 Strong transcription Primary T cells fromperipheralblood blood
43 chr1:151650800-151655800 Weak transcription Placenta Placenta
44 chr1:151650800-151656800 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:151651200-151655800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:151651200-151664800 Weak transcription Brain Germinal Matrix brain
47 chr1:151651400-151656800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:151652800-151660000 Strong transcription Fetal Intestine Large intestine
49 chr1:151653000-151655800 Weak transcription Fetal Intestine Small intestine
50 chr1:151653000-151660000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015