Variant report
| Variant | rs12145452 |
|---|---|
| Chromosome Location | chr1:175960418-175960419 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:175906400-175962600 | Weak transcription | NH-A | brain |
| 2 | chr1:175946000-175996000 | Weak transcription | HMEC | breast |
| 3 | chr1:175948200-175961400 | Weak transcription | NHLF | lung |
| 4 | chr1:175950000-175961200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 5 | chr1:175953600-175960800 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 6 | chr1:175953800-175961000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 7 | chr1:175953800-175962000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr1:175953800-175999600 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr1:175954000-175961000 | Weak transcription | Esophagus | oesophagus |
| 10 | chr1:175954000-175962000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 11 | chr1:175954000-175962000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 12 | chr1:175954000-175963600 | Weak transcription | Lung | lung |
| 13 | chr1:175954000-175977800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 14 | chr1:175954000-175978000 | Weak transcription | Left Ventricle | heart |
| 15 | chr1:175954000-175987800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr1:175954200-175960600 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr1:175954200-175961600 | Weak transcription | Brain Hippocampus Middle | brain |
| 18 | chr1:175954200-175962000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 19 | chr1:175954600-175964600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 20 | chr1:175954800-175961000 | Strong transcription | Primary B cells from cord blood | blood |
| 21 | chr1:175954800-175961000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 22 | chr1:175954800-175961800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 23 | chr1:175954800-175962200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr1:175954800-175963000 | Weak transcription | Brain Anterior Caudate | brain |
| 25 | chr1:175954800-175968600 | Weak transcription | Fetal Muscle Leg | muscle |
| 26 | chr1:175955000-175960600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 27 | chr1:175955000-175962000 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr1:175955000-175962200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 29 | chr1:175955000-175963800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 30 | chr1:175955400-175961600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 31 | chr1:175956000-175963000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 32 | chr1:175956000-175963400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 33 | chr1:175956200-175961200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 34 | chr1:175956200-175963600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 35 | chr1:175956600-175961800 | Weak transcription | GM12878-XiMat | blood |
| 36 | chr1:175957000-175981200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 37 | chr1:175957400-175962800 | Weak transcription | NHDF-Ad | bronchial |
| 38 | chr1:175957600-175960800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 39 | chr1:175957600-175977400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 40 | chr1:175957600-175977400 | Weak transcription | HSMM | muscle |
| 41 | chr1:175957800-175962200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 42 | chr1:175957800-175971200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 43 | chr1:175957800-176022000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 44 | chr1:175958000-175961600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 45 | chr1:175958000-175962000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 46 | chr1:175958000-175962600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 47 | chr1:175958000-175964000 | Weak transcription | Primary T cells from cord blood | blood |
| 48 | chr1:175958000-175965000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 49 | chr1:175958000-175977200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 50 | chr1:175958000-175977200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
