Variant report

Variant rs12165276
Chromosome Location chr21:40330772-40330773
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:40318000-40331200 Weak transcription Aorta Aorta
2 chr21:40326000-40331800 Enhancers Stomach Mucosa stomach
3 chr21:40326000-40332200 Enhancers Fetal Lung lung
4 chr21:40326200-40331000 Enhancers HepG2 liver
5 chr21:40326200-40332800 Enhancers Fetal Intestine Large intestine
6 chr21:40326400-40332400 Enhancers Fetal Intestine Small intestine
7 chr21:40326800-40331800 Enhancers Fetal Stomach stomach
8 chr21:40326800-40331800 Enhancers NHEK skin
9 chr21:40326800-40332000 Enhancers HMEC breast
10 chr21:40327000-40331600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr21:40327200-40331600 Enhancers Fetal Heart heart
12 chr21:40327200-40332200 Enhancers NHLF lung
13 chr21:40327400-40332000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr21:40327400-40332000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr21:40327400-40332400 Enhancers Placenta Amnion Placenta Amnion
16 chr21:40327600-40330800 Enhancers Left Ventricle heart
17 chr21:40327600-40332400 Enhancers Placenta Placenta
18 chr21:40327800-40330800 Enhancers Right Ventricle heart
19 chr21:40327800-40332000 Enhancers Fetal Thymus thymus
20 chr21:40328200-40330800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr21:40328200-40331600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr21:40328200-40332200 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr21:40328400-40331600 Enhancers Primary hematopoietic stem cells blood
24 chr21:40328400-40331800 Enhancers Duodenum Mucosa Duodenum
25 chr21:40328600-40330800 Enhancers Liver Liver
26 chr21:40328600-40331400 Enhancers Rectal Mucosa Donor 31 rectum
27 chr21:40328600-40331600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr21:40328600-40332200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr21:40328800-40332000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr21:40329000-40331400 Enhancers Colonic Mucosa Colon
31 chr21:40329000-40332000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr21:40329000-40332400 Enhancers NHDF-Ad bronchial
33 chr21:40329000-40333200 Enhancers Dnd41 blood
34 chr21:40329200-40331800 Enhancers Osteobl bone
35 chr21:40329400-40331800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr21:40329400-40332000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr21:40329400-40332200 Enhancers Rectal Mucosa Donor 29 rectum
38 chr21:40329400-40332200 Enhancers K562 blood
39 chr21:40329400-40334200 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr21:40329600-40330800 Weak transcription HSMM muscle
41 chr21:40329600-40331000 Weak transcription Primary monocytes fromperipheralblood blood
42 chr21:40329600-40332000 Enhancers Thymus Thymus
43 chr21:40329600-40332400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr21:40329800-40330800 Enhancers Right Atrium heart
45 chr21:40329800-40330800 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr21:40329800-40331200 Enhancers Spleen Spleen
47 chr21:40329800-40331600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr21:40329800-40331800 Enhancers Brain Inferior Temporal Lobe brain
49 chr21:40329800-40331800 Enhancers Gastric stomach
50 chr21:40329800-40332800 Enhancers Sigmoid Colon Sigmoid Colon

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