| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1064081 |
chr22:29826745-30623965 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
47 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv544677 |
chr22:29826745-30623965 |
Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
47 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv829165 |
chr22:30450894-30459421 |
Enhancers Weak transcription ZNF genes & repeats Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv819812 |
chr22:30453933-30470372 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv829166 |
chr22:30456513-30459105 |
Enhancers Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv829167 |
chr22:30456513-30459421 |
Enhancers ZNF genes & repeats Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv829168 |
chr22:30456513-30470312 |
Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015