Variant report

Variant	rs12210276
Chromosome Location	chr6:71792069-71792070
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71791384..71793832-chr6:71796277..71798212,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10455721	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10455722	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12192717	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12193219	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12195809	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12213692	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7742804	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7755915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71788800-71792200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:71789000-71792800	Enhancers	HSMM	muscle
3	chr6:71789000-71793600	Enhancers	Fetal Lung	lung
4	chr6:71790200-71792400	Weak transcription	Left Ventricle	heart
5	chr6:71790400-71792400	Enhancers	Fetal Kidney	kidney
6	chr6:71791000-71792400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr6:71791200-71792200	Enhancers	Fetal Heart	heart
8	chr6:71791200-71792600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr6:71791200-71793400	Enhancers	Fetal Muscle Leg	muscle
10	chr6:71791400-71792400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr6:71791400-71792600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:71791400-71792600	Weak transcription	NH-A	brain
13	chr6:71791400-71792800	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr6:71791400-71793400	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr6:71791600-71792200	Active TSS	Brain Cingulate Gyrus	brain
16	chr6:71791600-71792400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
17	chr6:71791600-71792400	Flanking Active TSS	Adipose Nuclei	Adipose
18	chr6:71791600-71793200	Enhancers	Cortex derived primary cultured neurospheres	brain
19	chr6:71791800-71792200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr6:71791800-71792200	Active TSS	Liver	Liver
21	chr6:71791800-71792200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
22	chr6:71791800-71792200	Active TSS	Pancreatic Islets	Pancreatic Islet
23	chr6:71791800-71792200	Active TSS	Skeletal Muscle Female	skeletal muscle
24	chr6:71791800-71792200	Active TSS	NHDF-Ad	bronchial
25	chr6:71791800-71792200	Active TSS	Osteobl	bone
26	chr6:71791800-71792400	Active TSS	Aorta	Aorta
27	chr6:71791800-71792400	Active TSS	Brain Hippocampus Middle	brain
28	chr6:71791800-71792400	Active TSS	Brain Inferior Temporal Lobe	brain
29	chr6:71791800-71792400	Active TSS	Brain Substantia Nigra	brain
30	chr6:71791800-71792400	Active TSS	Psoas Muscle	Psoas
31	chr6:71791800-71792400	Active TSS	Right Atrium	heart
32	chr6:71791800-71792400	Active TSS	HSMMtube	muscle
33	chr6:71791800-71792600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr6:71791800-71792600	Active TSS	Brain Anterior Caudate	brain
35	chr6:71791800-71793000	Flanking Active TSS	NHLF	lung
36	chr6:71791800-71797600	Weak transcription	Fetal Stomach	stomach
37	chr6:71792000-71792200	Flanking Active TSS	Colon Smooth Muscle	Colon
38	chr6:71792000-71792400	Active TSS	Duodenum Smooth Muscle	Duodenum
39	chr6:71792000-71792600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr6:71792000-71792600	Active TSS	Stomach Smooth Muscle	stomach
41	chr6:71792000-71793200	Enhancers	Brain Angular Gyrus	brain

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