The 2.0 version of rSNPBase

Variant report

Variant rs12218964
Chromosome Location chr10:93685618-93685619
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93682800-93689400 Active TSS GM12878-XiMat blood
2 chr10:93683400-93685800 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr10:93684200-93688600 Weak transcription Pancreas Pancrea
4 chr10:93684200-93691200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr10:93684200-93691200 Weak transcription Gastric stomach
6 chr10:93684200-93691800 Weak transcription Lung lung
7 chr10:93684200-93692600 Weak transcription Spleen Spleen
8 chr10:93684200-93694000 Weak transcription Esophagus oesophagus
9 chr10:93684400-93691200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr10:93684400-93692600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr10:93684600-93687000 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr10:93684600-93688200 Weak transcription H9 Cell Line embryonic stem cell
13 chr10:93684600-93719600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr10:93684800-93685800 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr10:93684800-93685800 Enhancers Fetal Heart heart
16 chr10:93684800-93686200 Weak transcription Brain Substantia Nigra brain
17 chr10:93684800-93686400 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr10:93684800-93686600 Enhancers Primary monocytes fromperipheralblood blood
19 chr10:93684800-93686600 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr10:93684800-93686800 Enhancers Primary T helper cells fromperipheralblood blood
21 chr10:93684800-93687000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr10:93684800-93689000 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr10:93684800-93691200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr10:93685000-93685800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr10:93685000-93685800 Enhancers Primary B cells from cord blood blood
26 chr10:93685000-93685800 Weak transcription Primary B cells from peripheral blood blood
27 chr10:93685000-93685800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr10:93685000-93685800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:93685000-93685800 Enhancers HUVEC blood vessel
30 chr10:93685000-93686000 Enhancers Cortex derived primary cultured neurospheres brain
31 chr10:93685000-93686000 Enhancers Ovary ovary
32 chr10:93685000-93686200 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr10:93685000-93686200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr10:93685000-93686200 Weak transcription Fetal Lung lung
35 chr10:93685000-93686200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr10:93685000-93686400 Enhancers Colon Smooth Muscle Colon
37 chr10:93685000-93686400 Enhancers Fetal Brain Male brain
38 chr10:93685000-93686600 Enhancers Brain Germinal Matrix brain
39 chr10:93685000-93686600 Enhancers Brain Hippocampus Middle brain
40 chr10:93685000-93686800 Enhancers Liver Liver
41 chr10:93685000-93686800 Enhancers Brain Angular Gyrus brain
42 chr10:93685000-93687600 Weak transcription Fetal Brain Female brain
43 chr10:93685000-93688600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr10:93685000-93688600 Weak transcription Right Atrium heart
45 chr10:93685000-93690000 Weak transcription Fetal Stomach stomach
46 chr10:93685000-93690000 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr10:93685000-93690200 Weak transcription Fetal Intestine Large intestine
48 chr10:93685000-93690200 Weak transcription Rectal Smooth Muscle rectum
49 chr10:93685000-93690200 Weak transcription Stomach Mucosa stomach
50 chr10:93685000-93691200 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015