Variant report
| Variant | rs12239276 |
|---|---|
| Chromosome Location | chr1:62401340-62401341 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:62336000-62408600 | Weak transcription | Pancreas | Pancrea |
| 2 | chr1:62346200-62417600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr1:62350600-62428200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 4 | chr1:62350800-62417600 | Weak transcription | Ovary | ovary |
| 5 | chr1:62353800-62408800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 6 | chr1:62361600-62408800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr1:62362000-62408600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 8 | chr1:62372400-62408800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 9 | chr1:62372400-62417600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 10 | chr1:62374600-62410600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 11 | chr1:62375200-62404600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 12 | chr1:62376200-62417600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr1:62380600-62408600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 14 | chr1:62380800-62410000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr1:62381000-62408200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr1:62381000-62416000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 17 | chr1:62381200-62417400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 18 | chr1:62381200-62418400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 19 | chr1:62381600-62402800 | Weak transcription | HepG2 | liver |
| 20 | chr1:62383400-62408000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 21 | chr1:62384600-62403000 | Weak transcription | Fetal Stomach | stomach |
| 22 | chr1:62384600-62408200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 23 | chr1:62384600-62408800 | Weak transcription | Fetal Intestine Large | intestine |
| 24 | chr1:62385000-62494200 | Weak transcription | Aorta | Aorta |
| 25 | chr1:62385400-62408400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 26 | chr1:62385400-62408600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 27 | chr1:62386000-62408600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 28 | chr1:62391800-62409000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 29 | chr1:62392000-62408800 | Weak transcription | Gastric | stomach |
| 30 | chr1:62392600-62408600 | Weak transcription | Stomach Mucosa | stomach |
| 31 | chr1:62392600-62408800 | Weak transcription | Left Ventricle | heart |
| 32 | chr1:62393800-62402800 | Weak transcription | Hela-S3 | cervix |
| 33 | chr1:62393800-62422400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 34 | chr1:62395000-62408600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 35 | chr1:62395000-62410800 | Weak transcription | Liver | Liver |
| 36 | chr1:62395800-62408200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 37 | chr1:62396200-62408600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 38 | chr1:62396200-62416000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 39 | chr1:62396200-62417200 | Weak transcription | HMEC | breast |
| 40 | chr1:62396400-62408200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 41 | chr1:62396400-62408600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 42 | chr1:62396400-62418000 | Weak transcription | Fetal Kidney | kidney |
| 43 | chr1:62397400-62408200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 44 | chr1:62397600-62408600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 45 | chr1:62398000-62408200 | Weak transcription | NHEK | skin |
| 46 | chr1:62398200-62402400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 47 | chr1:62398200-62408400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr1:62398200-62408600 | Weak transcription | Esophagus | oesophagus |
| 49 | chr1:62398600-62405400 | Weak transcription | Fetal Intestine Small | intestine |
| 50 | chr1:62398800-62408600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
