The 2.0 version of rSNPBase

Variant report

Variant rs12251111
Chromosome Location chr10:27311299-27311300
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27257600-27319000 Weak transcription Stomach Smooth Muscle stomach
2 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
3 chr10:27285000-27319200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr10:27285400-27312000 Weak transcription Brain Hippocampus Middle brain
5 chr10:27285400-27319200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr10:27286400-27316600 Weak transcription Duodenum Mucosa Duodenum
7 chr10:27286600-27311800 Weak transcription Primary T cells fromperipheralblood blood
8 chr10:27286600-27312000 Weak transcription Fetal Thymus thymus
9 chr10:27287000-27312000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr10:27287000-27350600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr10:27287800-27350600 Weak transcription Aorta Aorta
12 chr10:27288400-27329400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr10:27288600-27312000 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr10:27288600-27312000 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr10:27288800-27357000 Weak transcription Gastric stomach
16 chr10:27289200-27361200 Weak transcription Brain Cingulate Gyrus brain
17 chr10:27289600-27312400 Weak transcription Brain Substantia Nigra brain
18 chr10:27289600-27314200 Weak transcription Spleen Spleen
19 chr10:27289600-27318800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr10:27289600-27360800 Weak transcription Hela-S3 cervix
21 chr10:27289800-27360800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr10:27290200-27351400 Weak transcription Thymus Thymus
23 chr10:27290200-27361400 Weak transcription Placenta Placenta
24 chr10:27290600-27314800 Weak transcription Fetal Kidney kidney
25 chr10:27290800-27326800 Weak transcription Osteobl bone
26 chr10:27291000-27312200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr10:27291200-27316600 Weak transcription H1 Cell Line embryonic stem cell
28 chr10:27291200-27324000 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr10:27291400-27324000 Weak transcription Brain Germinal Matrix brain
30 chr10:27291400-27324200 Weak transcription Primary hematopoietic stem cells blood
31 chr10:27291400-27360600 Weak transcription Lung lung
32 chr10:27291600-27312600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr10:27291600-27314600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr10:27291600-27316400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr10:27291600-27321200 Weak transcription Fetal Intestine Small intestine
36 chr10:27291600-27325200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr10:27291600-27331200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr10:27291600-27351000 Weak transcription NHLF lung
39 chr10:27291600-27388000 Weak transcription Small Intestine intestine
40 chr10:27291800-27325600 Weak transcription Primary B cells from cord blood blood
41 chr10:27292000-27362200 Weak transcription Fetal Brain Male brain
42 chr10:27292200-27334800 Weak transcription Colon Smooth Muscle Colon
43 chr10:27292600-27312200 Weak transcription Brain Anterior Caudate brain
44 chr10:27292800-27315800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr10:27293000-27312400 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr10:27293600-27340200 Weak transcription A549 lung
47 chr10:27294400-27314800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr10:27295400-27319000 Weak transcription HepG2 liver
49 chr10:27295600-27319200 Weak transcription Ovary ovary
50 chr10:27295600-27328800 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015