Variant report

Variant	rs12258145
Chromosome Location	chr10:22767074-22767075
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22763614..22767243-chr10:22769370..22771650,4	K562	blood:
2	chr10:22764922..22767473-chr10:22775286..22777251,2	MCF-7	breast:
3	chr10:22760035..22762735-chr10:22766285..22768720,2	K562	blood:

rs_ID	r²[population]
rs10828309	0.88[AFR][1000 genomes]
rs11013018	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7073403	0.84[AFR][1000 genomes]
rs73598535	1.00[ASN][1000 genomes]
rs7923274	0.92[AFR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22764400-22767200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
2	chr10:22764600-22767200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
3	chr10:22764800-22767200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
4	chr10:22764800-22767200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
5	chr10:22764800-22767200	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr10:22765600-22767800	Weak transcription	HSMMtube	muscle
7	chr10:22765800-22767200	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr10:22765800-22767600	Weak transcription	Brain Substantia Nigra	brain
9	chr10:22765800-22806600	Weak transcription	Right Atrium	heart
10	chr10:22766000-22767600	Weak transcription	Brain Angular Gyrus	brain
11	chr10:22766000-22767600	Weak transcription	Brain Cingulate Gyrus	brain
12	chr10:22766000-22767600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr10:22766000-22768200	Bivalent Enhancer	Placenta	Placenta
14	chr10:22766200-22767600	Weak transcription	Brain Anterior Caudate	brain
15	chr10:22766600-22767600	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr10:22766800-22767200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
17	chr10:22766800-22769200	Enhancers	Placenta Amnion	Placenta Amnion
18	chr10:22767000-22767200	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
19	chr10:22767000-22767200	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
20	chr10:22767000-22767200	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
21	chr10:22767000-22767200	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
22	chr10:22767000-22767200	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr10:22767000-22767200	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
24	chr10:22767000-22768200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood

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