The 2.0 version of rSNPBase

Variant report

Variant rs12259908
Chromosome Location chr10:98981140-98981141
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:98968000-98982200 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr10:98968000-98982600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr10:98970400-98982000 Weak transcription Fetal Kidney kidney
4 chr10:98970800-98982200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr10:98971200-98981400 Weak transcription Fetal Muscle Leg muscle
6 chr10:98971800-98982400 Weak transcription Stomach Smooth Muscle stomach
7 chr10:98972400-98988400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr10:98973200-98981400 Weak transcription Fetal Muscle Trunk muscle
9 chr10:98973400-98981400 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr10:98973800-99019000 Weak transcription HepG2 liver
11 chr10:98974000-98982600 Weak transcription Esophagus oesophagus
12 chr10:98974000-98986200 Weak transcription Pancreas Pancrea
13 chr10:98975200-98981400 Weak transcription Spleen Spleen
14 chr10:98975600-98981800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr10:98975800-98982200 Weak transcription Ovary ovary
16 chr10:98976000-99011400 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr10:98976400-98988200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr10:98976800-98988200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr10:98977000-98981400 Weak transcription Primary hematopoietic stem cells blood
20 chr10:98977200-99023800 Weak transcription Colonic Mucosa Colon
21 chr10:98977400-99027000 Weak transcription Right Ventricle heart
22 chr10:98977600-98984800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr10:98978000-98982000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr10:98978000-98982200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr10:98978200-98982200 Weak transcription Primary B cells from cord blood blood
26 chr10:98978200-98985000 Weak transcription Adipose Nuclei Adipose
27 chr10:98978200-98985600 Weak transcription HMEC breast
28 chr10:98978200-99003400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr10:98978200-99003600 Weak transcription NHEK skin
30 chr10:98978400-98981400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr10:98978400-98983000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr10:98978600-98982000 Weak transcription K562 blood
33 chr10:98978600-98982200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr10:98978600-98982600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr10:98978600-98982600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr10:98978600-98982600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr10:98978600-98982600 Weak transcription Osteobl bone
38 chr10:98978600-98983800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr10:98978600-98984000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr10:98978600-98984400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr10:98978600-98984400 Weak transcription NHDF-Ad bronchial
42 chr10:98978600-98985600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr10:98978600-98988800 Weak transcription Muscle Satellite Cultured Cells --
44 chr10:98978600-99019000 Weak transcription HSMMtube muscle
45 chr10:98978600-99030400 Weak transcription NH-A brain
46 chr10:98978600-99037400 Weak transcription HSMM muscle
47 chr10:98978600-99051800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr10:98979000-98982000 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr10:98979000-98982400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr10:98979000-98983600 Strong transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015