Variant report

Variant rs12261340
Chromosome Location chr10:604437-604438
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:583200-604800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr10:593600-605000 Weak transcription NH-A brain
3 chr10:598000-607400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr10:598200-605600 Weak transcription Fetal Lung lung
5 chr10:600200-605200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr10:600400-608000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr10:600600-606200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr10:600600-608000 Enhancers Left Ventricle heart
9 chr10:601000-610000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr10:601200-604600 Enhancers Right Ventricle heart
11 chr10:601400-604800 Enhancers Pancreas Pancrea
12 chr10:601600-605600 Weak transcription Psoas Muscle Psoas
13 chr10:601600-613600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr10:602400-604800 Enhancers Brain Anterior Caudate brain
15 chr10:602400-604800 Enhancers Colon Smooth Muscle Colon
16 chr10:602400-605000 Enhancers Brain Inferior Temporal Lobe brain
17 chr10:602400-605000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
18 chr10:602400-605400 Enhancers Fetal Heart heart
19 chr10:602400-609600 Enhancers Brain Substantia Nigra brain
20 chr10:602600-604600 Enhancers Primary T helper cells fromperipheralblood blood
21 chr10:602600-604800 Enhancers Brain Angular Gyrus brain
22 chr10:602600-605800 Enhancers HUES6 Cell Line embryonic stem cell
23 chr10:602600-606400 Enhancers Brain Hippocampus Middle brain
24 chr10:602600-609200 Enhancers Fetal Muscle Leg muscle
25 chr10:602800-605200 Enhancers HUES64 Cell Line embryonic stem cell
26 chr10:602800-605400 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr10:602800-605400 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr10:602800-605800 Enhancers H1 Cell Line embryonic stem cell
29 chr10:602800-605800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr10:602800-606400 Enhancers Ovary ovary
31 chr10:603000-606400 Enhancers HUES48 Cell Line embryonic stem cell
32 chr10:603200-604800 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr10:603200-605000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr10:603200-606200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr10:603400-605400 Weak transcription Fetal Intestine Small intestine
36 chr10:603400-605400 Weak transcription Fetal Stomach stomach
37 chr10:603400-606600 Weak transcription Stomach Smooth Muscle stomach
38 chr10:603400-607200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr10:603600-605000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr10:603600-609800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr10:603800-604600 Enhancers Brain Cingulate Gyrus brain
42 chr10:603800-604600 Enhancers Gastric stomach
43 chr10:603800-604800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr10:603800-605600 Enhancers H9 Cell Line embryonic stem cell
45 chr10:603800-606000 Enhancers Fetal Brain Female brain
46 chr10:604000-604600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
47 chr10:604000-604600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr10:604000-604600 Enhancers Duodenum Smooth Muscle Duodenum
49 chr10:604000-604800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr10:604000-605600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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