Variant report

Variant	rs12266689
Chromosome Location	chr10:22303668-22303669
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs12250894	1.00[EUR][1000 genomes]
rs28665277	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831808	chr10:22187850-22357814	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22293400-22304000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:22299800-22305000	Weak transcription	Fetal Lung	lung
3	chr10:22300400-22303800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:22300400-22305400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr10:22303600-22304200	Enhancers	Primary hematopoietic stem cells	blood
6	chr10:22303600-22305800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr10:22303600-22306200	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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