The 2.0 version of rSNPBase

Variant report

Variant rs12274472
Chromosome Location chr11:94282215-94282216
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94276800-94282600 Active TSS Fetal Intestine Large intestine
2 chr11:94277000-94283400 Active TSS GM12878-XiMat blood
3 chr11:94278400-94283400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr11:94278600-94282400 Enhancers Primary T helper cells PMA-I stimulated --
5 chr11:94278600-94282400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr11:94279200-94282800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr11:94279200-94296000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr11:94279400-94282400 Weak transcription Small Intestine intestine
9 chr11:94279400-94282600 Enhancers Primary mononuclear cells fromperipheralblood Blood
10 chr11:94279400-94287200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:94279600-94284800 Weak transcription Placenta Placenta
12 chr11:94279600-94285800 Weak transcription Fetal Muscle Trunk muscle
13 chr11:94279600-94287200 Weak transcription Ovary ovary
14 chr11:94279600-94290200 Weak transcription HSMM muscle
15 chr11:94280200-94282400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr11:94280200-94283400 Enhancers Placenta Amnion Placenta Amnion
17 chr11:94280400-94283200 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr11:94280400-94283200 Weak transcription Thymus Thymus
19 chr11:94280400-94283400 Weak transcription Primary T cells fromperipheralblood blood
20 chr11:94280400-94283400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr11:94280400-94283600 Weak transcription Lung lung
22 chr11:94280400-94285400 Weak transcription Left Ventricle heart
23 chr11:94280400-94286600 Weak transcription Esophagus oesophagus
24 chr11:94280400-94287200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr11:94280400-94287200 Weak transcription Gastric stomach
26 chr11:94280400-94291200 Weak transcription NHLF lung
27 chr11:94280600-94282600 Enhancers Fetal Brain Male brain
28 chr11:94280600-94283200 Weak transcription Brain Angular Gyrus brain
29 chr11:94280600-94287200 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr11:94280600-94296200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:94280800-94282600 Weak transcription Right Atrium heart
32 chr11:94280800-94283000 Weak transcription Brain Substantia Nigra brain
33 chr11:94280800-94283400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr11:94280800-94289800 Weak transcription Muscle Satellite Cultured Cells --
35 chr11:94281000-94282400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr11:94281000-94282600 Genic enhancers Dnd41 blood
37 chr11:94281000-94283400 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr11:94281000-94283400 Weak transcription Fetal Thymus thymus
39 chr11:94281000-94283600 Enhancers Primary neutrophils fromperipheralblood blood
40 chr11:94281000-94289800 Weak transcription Osteobl bone
41 chr11:94281000-94290000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr11:94281000-94290200 Weak transcription NHDF-Ad bronchial
43 chr11:94281000-94319200 Weak transcription Aorta Aorta
44 chr11:94281200-94282400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr11:94281200-94282600 Enhancers Primary B cells from cord blood blood
46 chr11:94281200-94284000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr11:94281200-94284400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr11:94281400-94282400 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr11:94281400-94282600 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr11:94281400-94283000 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015