Variant report

Variant rs12281209
Chromosome Location chr11:67780320-67780321
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67771600-67797600 Weak transcription Small Intestine intestine
2 chr11:67772600-67792400 Weak transcription H9 Cell Line embryonic stem cell
3 chr11:67775000-67782400 Enhancers Cortex derived primary cultured neurospheres brain
4 chr11:67777400-67780400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
5 chr11:67777400-67782600 Flanking Active TSS Muscle Satellite Cultured Cells --
6 chr11:67777600-67781800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr11:67778000-67780400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr11:67778000-67781600 Weak transcription HUVEC blood vessel
9 chr11:67778200-67781600 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr11:67778200-67782800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr11:67778400-67780800 Enhancers Gastric stomach
12 chr11:67778400-67781400 Weak transcription Esophagus oesophagus
13 chr11:67778400-67782000 Flanking Active TSS Hela-S3 cervix
14 chr11:67778400-67782400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr11:67778400-67782400 Enhancers Skeletal Muscle Female skeletal muscle
16 chr11:67778400-67782600 Weak transcription Thymus Thymus
17 chr11:67778400-67782800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:67778400-67782800 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr11:67778400-67782800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr11:67778400-67782800 Enhancers Pancreas Pancrea
21 chr11:67778400-67787400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr11:67778600-67780400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr11:67778600-67780400 Enhancers Spleen Spleen
24 chr11:67778600-67781200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr11:67778600-67781400 Enhancers Fetal Muscle Trunk muscle
26 chr11:67778600-67781600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr11:67778600-67782000 Enhancers Brain Cingulate Gyrus brain
28 chr11:67778600-67783000 Enhancers Placenta Placenta
29 chr11:67778600-67784000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr11:67778600-67784400 Weak transcription Right Atrium heart
31 chr11:67778600-67788000 Weak transcription H1 Cell Line embryonic stem cell
32 chr11:67778800-67781800 Enhancers HMEC breast
33 chr11:67778800-67782000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr11:67778800-67782400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr11:67778800-67782600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr11:67778800-67782800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr11:67778800-67782800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:67778800-67783000 Enhancers Adipose Nuclei Adipose
39 chr11:67778800-67784400 Weak transcription Brain Angular Gyrus brain
40 chr11:67779000-67780400 Enhancers Brain Substantia Nigra brain
41 chr11:67779000-67780400 Genic enhancers NHLF lung
42 chr11:67779000-67780600 Enhancers NH-A brain
43 chr11:67779000-67780800 Enhancers Primary monocytes fromperipheralblood blood
44 chr11:67779000-67781000 Enhancers HSMMtube muscle
45 chr11:67779000-67781200 Weak transcription Brain Anterior Caudate brain
46 chr11:67779000-67781400 Weak transcription Colon Smooth Muscle Colon
47 chr11:67779000-67781600 Weak transcription Fetal Kidney kidney
48 chr11:67779000-67782000 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr11:67779000-67782600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr11:67779000-67782600 Enhancers NHDF-Ad bronchial

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