Variant report

Variant rs12282960
Chromosome Location chr11:48125237-48125238
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:48108800-48125400 Weak transcription Rectal Smooth Muscle rectum
2 chr11:48111000-48125400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr11:48113800-48125400 Enhancers Brain Hippocampus Middle brain
4 chr11:48114600-48131400 Weak transcription Esophagus oesophagus
5 chr11:48115800-48127400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr11:48116200-48127400 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr11:48116400-48125600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr11:48116400-48128600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr11:48116600-48131200 Weak transcription Psoas Muscle Psoas
10 chr11:48118200-48125600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr11:48118200-48125600 Weak transcription HSMM muscle
12 chr11:48118800-48125400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr11:48118800-48129800 Weak transcription Lung lung
14 chr11:48118800-48131200 Weak transcription Ovary ovary
15 chr11:48119200-48125600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr11:48119600-48127800 Enhancers Brain Substantia Nigra brain
17 chr11:48119600-48131400 Weak transcription H9 Cell Line embryonic stem cell
18 chr11:48119800-48125400 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr11:48119800-48126800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr11:48119800-48127200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr11:48119800-48128800 Weak transcription Hela-S3 cervix
22 chr11:48120600-48125400 Enhancers Brain Cingulate Gyrus brain
23 chr11:48120600-48126200 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr11:48121600-48127400 Enhancers GM12878-XiMat blood
25 chr11:48121600-48127600 Enhancers Primary B cells from cord blood blood
26 chr11:48121800-48128200 Enhancers Fetal Intestine Small intestine
27 chr11:48122000-48127000 Weak transcription Primary T cells from cord blood blood
28 chr11:48122200-48125600 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr11:48122200-48126200 Weak transcription Primary monocytes fromperipheralblood blood
30 chr11:48122200-48128200 Enhancers Fetal Intestine Large intestine
31 chr11:48122600-48126400 Enhancers NHDF-Ad bronchial
32 chr11:48122600-48127600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr11:48122600-48127800 Enhancers Brain Angular Gyrus brain
34 chr11:48122600-48128200 Enhancers Fetal Muscle Leg muscle
35 chr11:48122600-48128400 Enhancers Rectal Mucosa Donor 31 rectum
36 chr11:48122800-48128200 Enhancers Sigmoid Colon Sigmoid Colon
37 chr11:48122800-48130600 Enhancers Spleen Spleen
38 chr11:48123000-48126200 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr11:48123200-48125400 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr11:48123200-48125400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr11:48123200-48125400 Weak transcription Placenta Amnion Placenta Amnion
42 chr11:48123200-48125600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr11:48123200-48126800 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr11:48123200-48131200 Weak transcription Stomach Smooth Muscle stomach
45 chr11:48123400-48125400 Weak transcription H1 Cell Line embryonic stem cell
46 chr11:48123400-48125400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr11:48123400-48125400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr11:48123400-48125400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr11:48123400-48125400 Weak transcription Right Atrium heart
50 chr11:48123400-48125600 Weak transcription iPS-18 Cell Line embryonic stem cell

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