The 2.0 version of rSNPBase

Variant report

Variant rs12283652
Chromosome Location chr11:34909078-34909079
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34859000-34909400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr11:34882000-34919800 Weak transcription Left Ventricle heart
3 chr11:34891200-34919200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr11:34892600-34913000 Weak transcription Brain Anterior Caudate brain
5 chr11:34893000-34921400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr11:34894600-34909600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr11:34895000-34912000 Weak transcription Brain Angular Gyrus brain
8 chr11:34895000-34921200 Weak transcription Right Ventricle heart
9 chr11:34895400-34912000 Weak transcription Brain Cingulate Gyrus brain
10 chr11:34896000-34912200 Weak transcription K562 blood
11 chr11:34896200-34909800 Weak transcription Pancreas Pancrea
12 chr11:34896600-34911600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr11:34897000-34913000 Weak transcription Lung lung
14 chr11:34897000-34919200 Weak transcription Fetal Stomach stomach
15 chr11:34897600-34919200 Weak transcription Fetal Heart heart
16 chr11:34898200-34926800 Weak transcription HSMMtube muscle
17 chr11:34898400-34912800 Weak transcription Brain Hippocampus Middle brain
18 chr11:34899000-34917400 Weak transcription HSMM muscle
19 chr11:34900000-34911600 Weak transcription A549 lung
20 chr11:34900000-34918200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr11:34900200-34917200 Weak transcription HUVEC blood vessel
22 chr11:34900200-34921000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr11:34900600-34909800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr11:34901000-34911200 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr11:34901200-34910600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr11:34901400-34917400 Weak transcription Fetal Kidney kidney
27 chr11:34901400-34920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr11:34901600-34910200 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr11:34901600-34918200 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr11:34901800-34909800 Weak transcription Osteobl bone
31 chr11:34901800-34916800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr11:34901800-34917000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr11:34902000-34912000 Weak transcription NHLF lung
34 chr11:34902000-34921600 Weak transcription Muscle Satellite Cultured Cells --
35 chr11:34902200-34911000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr11:34902200-34912000 Weak transcription NH-A brain
37 chr11:34902200-34915600 Weak transcription Colon Smooth Muscle Colon
38 chr11:34902400-34909400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr11:34902400-34912800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr11:34902800-34911800 Weak transcription Fetal Intestine Small intestine
41 chr11:34903400-34909800 Weak transcription Rectal Smooth Muscle rectum
42 chr11:34903600-34919200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr11:34903800-34909600 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr11:34903800-34912000 Weak transcription Hela-S3 cervix
45 chr11:34903800-34914200 Weak transcription Fetal Brain Male brain
46 chr11:34904000-34918600 Weak transcription NHDF-Ad bronchial
47 chr11:34904800-34910000 Strong transcription Fetal Muscle Leg muscle
48 chr11:34904800-34915600 Weak transcription GM12878-XiMat blood
49 chr11:34905000-34910400 Weak transcription Brain Germinal Matrix brain
50 chr11:34905000-34912800 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015