The 2.0 version of rSNPBase

Variant report

Variant rs12290962
Chromosome Location chr11:33962632-33962633
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33956200-33963200 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr11:33957600-33962800 Weak transcription Fetal Kidney kidney
3 chr11:33957800-33972400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr11:33959200-33962800 Weak transcription Muscle Satellite Cultured Cells --
5 chr11:33959200-33963000 Weak transcription HSMM muscle
6 chr11:33959200-33963200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr11:33959200-33964200 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr11:33959200-33964800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr11:33959400-33962800 Weak transcription Osteobl bone
10 chr11:33959400-33963000 Weak transcription NHEK skin
11 chr11:33959400-33963200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr11:33959400-33963200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr11:33959400-33963200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr11:33959400-33963200 Weak transcription Adipose Nuclei Adipose
15 chr11:33959400-33963200 Weak transcription Right Atrium heart
16 chr11:33959400-33963200 Weak transcription HSMMtube muscle
17 chr11:33959600-33962800 Weak transcription Primary hematopoietic stem cells blood
18 chr11:33959600-33963000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr11:33959800-33962800 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr11:33960000-33962800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr11:33961400-33964000 Flanking Active TSS GM12878-XiMat blood
22 chr11:33961400-33965600 Enhancers Primary B cells from peripheral blood blood
23 chr11:33961600-33963800 Enhancers Fetal Intestine Small intestine
24 chr11:33961600-33965000 Enhancers Hela-S3 cervix
25 chr11:33961800-33965000 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr11:33962000-33963200 Weak transcription NHLF lung
27 chr11:33962000-33963400 Enhancers Placenta Placenta
28 chr11:33962000-33964000 Enhancers Lung lung
29 chr11:33962000-33965600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr11:33962200-33963600 Enhancers Spleen Spleen
31 chr11:33962400-33965000 Enhancers NH-A brain
32 chr11:33962600-33962800 Enhancers Monocytes-CD14+_RO01746 blood
33 chr11:33962600-33963600 Enhancers Skeletal Muscle Male skeletal muscle
34 chr11:33962600-33963800 Enhancers Primary neutrophils fromperipheralblood blood
35 chr11:33962600-33963800 Enhancers Fetal Intestine Large intestine
36 chr11:33962600-33964000 Enhancers Fetal Muscle Trunk muscle
37 chr11:33962600-33964000 Enhancers Right Ventricle heart
38 chr11:33962600-33964000 Flanking Active TSS K562 blood
39 chr11:33962600-33964800 Enhancers Primary monocytes fromperipheralblood blood
40 chr11:33962600-33965200 Enhancers Fetal Muscle Leg muscle
41 chr11:33962600-33965200 Enhancers HUVEC blood vessel
42 chr11:33962600-33965400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr11:33962600-33965600 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015