Variant report

Variant rs12292418
Chromosome Location chr11:17351748-17351749
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17299000-17357200 Weak transcription Placenta Amnion Placenta Amnion
2 chr11:17299000-17357600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:17299000-17360600 Weak transcription Small Intestine intestine
4 chr11:17299200-17357000 Weak transcription Brain Substantia Nigra brain
5 chr11:17299400-17355400 Weak transcription Brain Angular Gyrus brain
6 chr11:17299400-17357000 Weak transcription Fetal Intestine Large intestine
7 chr11:17306200-17353000 Weak transcription Colon Smooth Muscle Colon
8 chr11:17308200-17353600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr11:17308200-17357600 Weak transcription HepG2 liver
10 chr11:17308200-17360800 Strong transcription Fetal Thymus thymus
11 chr11:17308200-17372600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr11:17308400-17356800 Weak transcription Brain Cingulate Gyrus brain
13 chr11:17308400-17361600 Weak transcription Brain Inferior Temporal Lobe brain
14 chr11:17309000-17355600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr11:17312200-17355400 Weak transcription Fetal Kidney kidney
16 chr11:17314200-17353400 Weak transcription Stomach Mucosa stomach
17 chr11:17315400-17353400 Weak transcription Rectal Smooth Muscle rectum
18 chr11:17316000-17360000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr11:17316000-17361000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr11:17318400-17355600 Weak transcription Gastric stomach
21 chr11:17318600-17353600 Weak transcription Brain Anterior Caudate brain
22 chr11:17319000-17356400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr11:17320800-17372400 Weak transcription GM12878-XiMat blood
24 chr11:17322600-17356200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr11:17324200-17353600 Weak transcription Aorta Aorta
26 chr11:17326400-17358000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr11:17327600-17353800 Weak transcription Ovary ovary
28 chr11:17330200-17358000 Weak transcription K562 blood
29 chr11:17331800-17357400 Weak transcription Brain Hippocampus Middle brain
30 chr11:17331800-17362000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr11:17334000-17371000 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr11:17335400-17355600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:17335400-17356000 Weak transcription Colonic Mucosa Colon
34 chr11:17335600-17361000 Strong transcription Dnd41 blood
35 chr11:17335800-17353600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr11:17335800-17357200 Weak transcription Fetal Brain Male brain
37 chr11:17335800-17357600 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr11:17336000-17353800 Weak transcription Primary B cells from cord blood blood
39 chr11:17336000-17355000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr11:17336200-17353800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr11:17336200-17355000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr11:17336200-17372600 Weak transcription HUVEC blood vessel
43 chr11:17336400-17353600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:17336400-17353600 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr11:17336400-17355800 Weak transcription Psoas Muscle Psoas
46 chr11:17336400-17360800 Weak transcription HSMM muscle
47 chr11:17336600-17353600 Weak transcription Fetal Brain Female brain
48 chr11:17336600-17355000 Weak transcription Duodenum Mucosa Duodenum
49 chr11:17336800-17358400 Weak transcription Brain Germinal Matrix brain
50 chr11:17336800-17365000 Weak transcription NHEK skin

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