Variant report
| Variant | rs12296518 |
|---|---|
| Chromosome Location | chr12:50468916-50468917 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50458200-50478200 | Weak transcription | Thymus | Thymus |
| 2 | chr12:50460600-50469200 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr12:50460600-50469400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr12:50460800-50469200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr12:50464400-50469200 | Weak transcription | Brain Substantia Nigra | brain |
| 6 | chr12:50464400-50469200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 7 | chr12:50464400-50469200 | Weak transcription | Fetal Lung | lung |
| 8 | chr12:50464400-50469200 | Weak transcription | Pancreas | Pancrea |
| 9 | chr12:50464400-50478200 | Weak transcription | Fetal Heart | heart |
| 10 | chr12:50464400-50478200 | Weak transcription | Right Atrium | heart |
| 11 | chr12:50464600-50469200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 12 | chr12:50464600-50469600 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr12:50464800-50469000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 14 | chr12:50464800-50469000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 15 | chr12:50464800-50469000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 16 | chr12:50464800-50469000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 17 | chr12:50464800-50469000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 18 | chr12:50464800-50469000 | Weak transcription | Stomach Mucosa | stomach |
| 19 | chr12:50464800-50469200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 20 | chr12:50464800-50469200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 21 | chr12:50464800-50469200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 22 | chr12:50464800-50469200 | Weak transcription | Brain Angular Gyrus | brain |
| 23 | chr12:50464800-50469200 | Weak transcription | Brain Anterior Caudate | brain |
| 24 | chr12:50464800-50469200 | Weak transcription | Brain Hippocampus Middle | brain |
| 25 | chr12:50464800-50469200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr12:50464800-50469200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 27 | chr12:50464800-50469200 | Weak transcription | HMEC | breast |
| 28 | chr12:50464800-50471600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr12:50464800-50474800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 30 | chr12:50464800-50478200 | Weak transcription | Colon Smooth Muscle | Colon |
| 31 | chr12:50464800-50478200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 32 | chr12:50464800-50478200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 33 | chr12:50464800-50478400 | Weak transcription | Primary T cells from cord blood | blood |
| 34 | chr12:50465000-50469000 | Strong transcription | Fetal Brain Female | brain |
| 35 | chr12:50465000-50469000 | Weak transcription | Placenta | Placenta |
| 36 | chr12:50465000-50469000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 37 | chr12:50465000-50469200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 38 | chr12:50465000-50469200 | Weak transcription | Hela-S3 | cervix |
| 39 | chr12:50466200-50472200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 40 | chr12:50466600-50469200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 41 | chr12:50466800-50469200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 42 | chr12:50466800-50469200 | Weak transcription | K562 | blood |
| 43 | chr12:50466800-50474800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 44 | chr12:50467000-50469200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 45 | chr12:50467200-50469200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 46 | chr12:50467400-50469000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 47 | chr12:50467800-50469200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 48 | chr12:50468000-50469200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 49 | chr12:50468400-50469200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 50 | chr12:50468400-50469400 | Enhancers | Fetal Brain Male | brain |
