Variant report

Variant	rs12299151
Chromosome Location	chr12:44302543-44302544
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11182312	1.00[EUR][1000 genomes]
rs12299112	1.00[EUR][1000 genomes]
rs12307180	1.00[EUR][1000 genomes]
rs12307644	1.00[EUR][1000 genomes]
rs12320752	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1406786	1.00[EUR][1000 genomes]
rs1675759	1.00[EUR][1000 genomes]
rs1731424	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7133336	1.00[EUR][1000 genomes]
rs7307888	1.00[EUR][1000 genomes]
rs7956766	1.00[EUR][1000 genomes]
rs7969724	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899048	chr12:44209423-44307888	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv526719	chr12:44298417-44315762	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44298800-44307800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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