The 2.0 version of rSNPBase

Variant report

Variant rs12300925
Chromosome Location chr12:1254451-1254452
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1192800-1280800 Weak transcription Fetal Muscle Leg muscle
2 chr12:1206800-1260600 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr12:1209800-1261600 Weak transcription Aorta Aorta
4 chr12:1213000-1258600 Weak transcription Lung lung
5 chr12:1213000-1266200 Weak transcription Ovary ovary
6 chr12:1213600-1277000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr12:1213800-1264400 Weak transcription Fetal Kidney kidney
8 chr12:1217600-1277200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:1221400-1260400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr12:1221600-1261800 Weak transcription Fetal Stomach stomach
11 chr12:1221800-1260800 Weak transcription Primary B cells from peripheral blood blood
12 chr12:1221800-1277000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr12:1221800-1277200 Weak transcription Stomach Smooth Muscle stomach
14 chr12:1221800-1283000 Weak transcription Esophagus oesophagus
15 chr12:1221800-1301800 Weak transcription Rectal Smooth Muscle rectum
16 chr12:1225200-1260600 Weak transcription HSMMtube muscle
17 chr12:1225400-1261600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr12:1225400-1261600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr12:1225400-1292800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr12:1225600-1260600 Weak transcription Primary monocytes fromperipheralblood blood
21 chr12:1225600-1280800 Weak transcription HSMM muscle
22 chr12:1225600-1280800 Weak transcription NHDF-Ad bronchial
23 chr12:1227000-1269200 Weak transcription Osteobl bone
24 chr12:1227600-1277200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr12:1227800-1272000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr12:1230400-1277200 Weak transcription Muscle Satellite Cultured Cells --
27 chr12:1230800-1257000 Weak transcription Primary B cells from cord blood blood
28 chr12:1230800-1260600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr12:1232400-1261400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr12:1237200-1261800 Weak transcription HMEC breast
31 chr12:1237400-1313800 Weak transcription Small Intestine intestine
32 chr12:1238800-1258000 Weak transcription Gastric stomach
33 chr12:1239600-1260000 Weak transcription Fetal Lung lung
34 chr12:1239600-1261600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr12:1239600-1279600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr12:1239600-1291600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr12:1239800-1261600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr12:1239800-1279800 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr12:1240000-1261400 Weak transcription Thymus Thymus
40 chr12:1240000-1283000 Weak transcription Right Ventricle heart
41 chr12:1240200-1272600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr12:1240200-1291000 Weak transcription A549 lung
43 chr12:1240600-1262800 Weak transcription Fetal Intestine Small intestine
44 chr12:1240600-1271400 Weak transcription HepG2 liver
45 chr12:1240800-1260600 Weak transcription Fetal Intestine Large intestine
46 chr12:1241200-1269400 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr12:1241200-1279600 Weak transcription Hela-S3 cervix
48 chr12:1241200-1301000 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr12:1241200-1306400 Weak transcription Dnd41 blood
50 chr12:1241200-1307200 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015