The 2.0 version of rSNPBase

Variant report

Variant rs12315057
Chromosome Location chr12:26220829-26220830
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:26192400-26228600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:26197200-26228600 Weak transcription Aorta Aorta
3 chr12:26199400-26221600 Weak transcription Brain Cingulate Gyrus brain
4 chr12:26200800-26229000 Weak transcription Fetal Muscle Trunk muscle
5 chr12:26201000-26223400 Weak transcription Fetal Muscle Leg muscle
6 chr12:26201200-26234600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr12:26201400-26221600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:26201600-26236200 Weak transcription Right Ventricle heart
9 chr12:26206800-26229600 Weak transcription Ovary ovary
10 chr12:26206800-26229800 Weak transcription Stomach Smooth Muscle stomach
11 chr12:26207000-26221400 Weak transcription Fetal Stomach stomach
12 chr12:26207400-26223600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr12:26207600-26221200 Weak transcription Pancreas Pancrea
14 chr12:26207800-26221400 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr12:26207800-26221400 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr12:26207800-26224000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr12:26207800-26224000 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr12:26208000-26221000 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr12:26208400-26234600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr12:26209600-26224800 Weak transcription Brain Anterior Caudate brain
21 chr12:26209600-26230400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr12:26211400-26227400 Weak transcription Placenta Placenta
23 chr12:26211600-26223800 Weak transcription Fetal Intestine Large intestine
24 chr12:26211600-26234600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr12:26211800-26230800 Weak transcription Fetal Lung lung
26 chr12:26212200-26223400 Weak transcription Colon Smooth Muscle Colon
27 chr12:26214400-26224800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr12:26215200-26230200 Weak transcription Adipose Nuclei Adipose
29 chr12:26215600-26222600 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr12:26215800-26221400 Weak transcription H9 Cell Line embryonic stem cell
31 chr12:26215800-26221600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr12:26215800-26230800 Weak transcription A549 lung
33 chr12:26216000-26221400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr12:26216000-26221600 Weak transcription Muscle Satellite Cultured Cells --
35 chr12:26216000-26226800 Weak transcription Hela-S3 cervix
36 chr12:26216000-26227600 Weak transcription HSMMtube muscle
37 chr12:26216000-26228800 Weak transcription HSMM muscle
38 chr12:26216000-26229200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr12:26216000-26230400 Weak transcription Psoas Muscle Psoas
40 chr12:26216000-26230600 Weak transcription HMEC breast
41 chr12:26216000-26230800 Weak transcription NHLF lung
42 chr12:26216000-26231000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr12:26216200-26221400 Weak transcription NHEK skin
44 chr12:26216200-26230800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr12:26216200-26231000 Weak transcription NH-A brain
46 chr12:26216400-26223400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr12:26217000-26226200 Strong transcription NHDF-Ad bronchial
48 chr12:26217400-26222400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr12:26217800-26223400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr12:26218200-26224000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015