Variant report

Variant	rs12318738
Chromosome Location	chr12:116843949-116843950
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:116842855..116845952-chr12:116869498..116873859,6	MCF-7	breast:
2	chr12:116714349..116716748-chr12:116843045..116844688,2	MCF-7	breast:
3	chr12:116828258..116830696-chr12:116843332..116846757,4	MCF-7	breast:
4	chr12:116843352..116845425-chr12:117039788..117041552,2	MCF-7	breast:
5	chr12:116843273..116846667-chr12:116853532..116856656,3	MCF-7	breast:
6	chr12:116826627..116830207-chr12:116841911..116847985,6	MCF-7	breast:
7	chr12:116843058..116845423-chr12:116858142..116861084,3	MCF-7	breast:
8	chr12:116830917..116832418-chr12:116843238..116846020,2	MCF-7	breast:
9	chr12:116836375..116838069-chr12:116843058..116845486,2	MCF-7	breast:
10	chr12:116842396..116845943-chr12:116861127..116865065,6	MCF-7	breast:
11	chr12:116843792..116845317-chr12:116930860..116933008,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000123066	Chromatin interaction

rs_ID	r²[population]
rs7975150	1.00[AFR][1000 genomes]

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:116833800-116844200	Weak transcription	Osteobl	bone
2	chr12:116839800-116844400	Weak transcription	Fetal Thymus	thymus
3	chr12:116840400-116844600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr12:116840400-116848800	Weak transcription	Primary B cells from peripheral blood	blood
5	chr12:116841600-116844400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr12:116841800-116844200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr12:116841800-116844400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr12:116842000-116844200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr12:116842000-116845200	Enhancers	Liver	Liver
10	chr12:116842200-116844200	Weak transcription	NHEK	skin
11	chr12:116842400-116853400	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr12:116842600-116850000	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr12:116842800-116844200	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr12:116842800-116845200	Enhancers	HepG2	liver
15	chr12:116842800-116845400	Enhancers	Placenta	Placenta
16	chr12:116843000-116845200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr12:116843000-116845200	Enhancers	Adipose Nuclei	Adipose
18	chr12:116843000-116845400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr12:116843000-116845400	Enhancers	Fetal Intestine Large	intestine
20	chr12:116843000-116845400	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr12:116843000-116845600	Enhancers	NHDF-Ad	bronchial
22	chr12:116843200-116845000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr12:116843200-116845400	Enhancers	Fetal Intestine Small	intestine
24	chr12:116843200-116845400	Enhancers	Fetal Lung	lung
25	chr12:116843200-116845400	Enhancers	Skeletal Muscle Female	skeletal muscle
26	chr12:116843400-116844000	Enhancers	Stomach Smooth Muscle	stomach
27	chr12:116843400-116844600	Enhancers	A549	lung
28	chr12:116843400-116845000	Enhancers	Fetal Muscle Trunk	muscle
29	chr12:116843400-116845200	Enhancers	Left Ventricle	heart
30	chr12:116843400-116845200	Enhancers	Psoas Muscle	Psoas
31	chr12:116843400-116845400	Enhancers	Primary neutrophils fromperipheralblood	blood
32	chr12:116843600-116844000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr12:116843600-116848400	Weak transcription	Duodenum Mucosa	Duodenum
34	chr12:116843800-116844000	Enhancers	Aorta	Aorta
35	chr12:116843800-116844000	Enhancers	Rectal Mucosa Donor 29	rectum
36	chr12:116843800-116845000	Enhancers	Right Atrium	heart
37	chr12:116843800-116845200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr12:116843800-116845200	Enhancers	Rectal Mucosa Donor 31	rectum
39	chr12:116843800-116845200	Enhancers	Hela-S3	cervix
40	chr12:116843800-116845400	Enhancers	NHLF	lung
41	chr12:116843800-116845600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr12:116843800-116848200	Weak transcription	Duodenum Smooth Muscle	Duodenum

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