Variant report

Variant rs12336459
Chromosome Location chr9:139894324-139894325
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139888800-139894600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr9:139889800-139894600 Enhancers Primary B cells from cord blood blood
3 chr9:139890200-139894400 Enhancers Spleen Spleen
4 chr9:139890600-139900800 Weak transcription Brain Cingulate Gyrus brain
5 chr9:139890800-139895200 Weak transcription Ovary ovary
6 chr9:139891000-139895000 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr9:139891400-139894600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr9:139891400-139895200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr9:139891400-139895400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr9:139891400-139896200 Enhancers Primary B cells from peripheral blood blood
11 chr9:139891400-139900600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr9:139891400-139901000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr9:139891600-139894600 Weak transcription HSMM muscle
14 chr9:139891600-139895400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr9:139891600-139895400 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr9:139891600-139898400 Enhancers Placenta Placenta
17 chr9:139891600-139911800 Weak transcription HSMMtube muscle
18 chr9:139892000-139894400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:139892000-139894600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr9:139892000-139921400 Weak transcription Right Atrium heart
21 chr9:139892200-139894400 Weak transcription HMEC breast
22 chr9:139892200-139894800 Weak transcription Fetal Lung lung
23 chr9:139892200-139895800 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr9:139892400-139894400 Weak transcription Adipose Nuclei Adipose
25 chr9:139892400-139894600 Enhancers Duodenum Mucosa Duodenum
26 chr9:139892400-139896400 Weak transcription Liver Liver
27 chr9:139892400-139899600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr9:139892400-139901200 Weak transcription Brain Anterior Caudate brain
29 chr9:139892600-139894600 Enhancers GM12878-XiMat blood
30 chr9:139892600-139894800 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr9:139892600-139895400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr9:139892600-139896800 Enhancers Primary monocytes fromperipheralblood blood
33 chr9:139892800-139894600 Enhancers Primary neutrophils fromperipheralblood blood
34 chr9:139892800-139894600 Weak transcription Primary T cells from cord blood blood
35 chr9:139892800-139900600 Weak transcription Right Ventricle heart
36 chr9:139892800-139902200 Weak transcription Gastric stomach
37 chr9:139892800-139906800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr9:139893000-139894400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr9:139893000-139894400 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr9:139893000-139894400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr9:139893000-139894400 Weak transcription Osteobl bone
42 chr9:139893000-139894600 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr9:139893000-139894600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr9:139893000-139894600 Enhancers Primary Natural Killer cells fromperipheralblood blood
45 chr9:139893000-139894600 Weak transcription Esophagus oesophagus
46 chr9:139893000-139894600 Weak transcription Placenta Amnion Placenta Amnion
47 chr9:139893000-139894600 Weak transcription NH-A brain
48 chr9:139893000-139895200 Enhancers Fetal Thymus thymus
49 chr9:139893000-139900400 Weak transcription Small Intestine intestine
50 chr9:139893000-139904200 Weak transcription Rectal Mucosa Donor 31 rectum

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