Variant report

Variant rs12339004
Chromosome Location chr9:93822678-93822679
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:93810200-93823000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr9:93819200-93823000 Enhancers HUVEC blood vessel
3 chr9:93820200-93823000 Weak transcription Psoas Muscle Psoas
4 chr9:93820200-93824600 Weak transcription Esophagus oesophagus
5 chr9:93820400-93822800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr9:93821200-93823000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr9:93821400-93823200 Enhancers Aorta Aorta
8 chr9:93821600-93823000 Enhancers Hela-S3 cervix
9 chr9:93821800-93823000 Enhancers Osteobl bone
10 chr9:93821800-93824000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr9:93821800-93824000 Enhancers Brain Hippocampus Middle brain
12 chr9:93821800-93824000 Enhancers HMEC breast
13 chr9:93821800-93824200 Enhancers Brain Substantia Nigra brain
14 chr9:93821800-93824200 Enhancers Colon Smooth Muscle Colon
15 chr9:93821800-93826200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr9:93822000-93822800 Flanking Active TSS Muscle Satellite Cultured Cells --
17 chr9:93822000-93822800 Enhancers Fetal Lung lung
18 chr9:93822000-93823000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr9:93822000-93823000 Enhancers Liver Liver
20 chr9:93822000-93823200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr9:93822000-93823800 Enhancers Adipose Nuclei Adipose
22 chr9:93822000-93824400 Enhancers Small Intestine intestine
23 chr9:93822000-93824600 Enhancers NHLF lung
24 chr9:93822000-93824800 Enhancers Placenta Placenta
25 chr9:93822000-93825800 Enhancers Skeletal Muscle Female skeletal muscle
26 chr9:93822000-93826400 Enhancers Skeletal Muscle Male skeletal muscle
27 chr9:93822200-93823000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr9:93822200-93823000 Enhancers Pancreatic Islets Pancreatic Islet
29 chr9:93822200-93823000 Enhancers NHEK skin
30 chr9:93822200-93823200 Weak transcription Ovary ovary
31 chr9:93822200-93823400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr9:93822200-93823800 Enhancers NH-A brain
33 chr9:93822200-93824400 Weak transcription Lung lung
34 chr9:93822400-93823000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr9:93822400-93823400 Weak transcription Brain Anterior Caudate brain
36 chr9:93822600-93822800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr9:93822600-93822800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr9:93822600-93822800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr9:93822600-93822800 Flanking Active TSS HepG2 liver
40 chr9:93822600-93822800 Flanking Active TSS NHDF-Ad bronchial
41 chr9:93822600-93823000 Active TSS A549 lung
42 chr9:93822600-93823400 Enhancers HUES48 Cell Line embryonic stem cell
43 chr9:93822600-93823600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr9:93822600-93824000 Enhancers Stomach Mucosa stomach
45 chr9:93822600-93824000 Enhancers HSMM muscle

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