Variant report

Variant rs12343234
Chromosome Location chr9:140385879-140385880
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140373800-140396000 Weak transcription Esophagus oesophagus
2 chr9:140374000-140386200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr9:140375000-140392200 Weak transcription Brain Angular Gyrus brain
4 chr9:140375400-140386000 Weak transcription Aorta Aorta
5 chr9:140375400-140387600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr9:140376800-140444000 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr9:140377000-140393400 Weak transcription Brain Substantia Nigra brain
8 chr9:140377000-140394400 Weak transcription Brain Cingulate Gyrus brain
9 chr9:140377000-140437000 Weak transcription Left Ventricle heart
10 chr9:140377200-140386200 Weak transcription Spleen Spleen
11 chr9:140377200-140387600 Weak transcription Right Ventricle heart
12 chr9:140377200-140393800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr9:140377200-140420200 Weak transcription Rectal Smooth Muscle rectum
14 chr9:140377400-140393200 Weak transcription Stomach Smooth Muscle stomach
15 chr9:140379400-140389000 Weak transcription Gastric stomach
16 chr9:140380600-140386000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr9:140380800-140387600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr9:140381600-140386400 Strong transcription Skeletal Muscle Female skeletal muscle
19 chr9:140381600-140386600 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr9:140381600-140396600 Strong transcription Liver Liver
21 chr9:140381800-140386800 Strong transcription Skeletal Muscle Male skeletal muscle
22 chr9:140382400-140387600 Weak transcription Fetal Stomach stomach
23 chr9:140382400-140389400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr9:140382600-140397400 Weak transcription Lung lung
25 chr9:140382800-140387600 Weak transcription Fetal Intestine Small intestine
26 chr9:140382800-140387800 Weak transcription Colonic Mucosa Colon
27 chr9:140382800-140387800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr9:140383000-140386200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr9:140383000-140387600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr9:140383000-140388800 Weak transcription Stomach Mucosa stomach
31 chr9:140383200-140386000 Strong transcription Primary B cells from cord blood blood
32 chr9:140383400-140386400 Strong transcription Adipose Nuclei Adipose
33 chr9:140383400-140388000 Weak transcription Pancreas Pancrea
34 chr9:140383600-140386000 Enhancers K562 blood
35 chr9:140384400-140391200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr9:140384600-140386600 Strong transcription Brain Inferior Temporal Lobe brain
37 chr9:140384600-140397600 Strong transcription Ovary ovary
38 chr9:140385200-140386000 Weak transcription Fetal Muscle Leg muscle
39 chr9:140385600-140386600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:140385600-140386600 Strong transcription Brain Anterior Caudate brain
41 chr9:140385800-140386400 Strong transcription Primary B cells from peripheral blood blood
42 chr9:140385800-140386400 Strong transcription Brain Hippocampus Middle brain
43 chr9:140385800-140386800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain

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