The 2.0 version of rSNPBase

Variant report

Variant rs12344612
Chromosome Location chr9:27016140-27016141
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26957000-27024000 Weak transcription Esophagus oesophagus
2 chr9:26957200-27026600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr9:26957200-27040000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr9:26974200-27023600 Weak transcription Fetal Brain Female brain
5 chr9:26976800-27017800 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr9:26977200-27019400 Weak transcription NH-A brain
7 chr9:26977800-27026000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr9:26979400-27024000 Weak transcription Small Intestine intestine
9 chr9:26982800-27023800 Weak transcription Lung lung
10 chr9:26983600-27023800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr9:26985200-27016200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr9:26985200-27017400 Weak transcription Brain Substantia Nigra brain
13 chr9:26985200-27024000 Weak transcription Right Ventricle heart
14 chr9:26985200-27024000 Weak transcription HSMM muscle
15 chr9:26985200-27063800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr9:26985400-27017400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr9:26985400-27017400 Weak transcription Brain Cingulate Gyrus brain
18 chr9:26985400-27017800 Weak transcription Fetal Thymus thymus
19 chr9:26985400-27024000 Weak transcription A549 lung
20 chr9:26985600-27024400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr9:26985800-27018800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr9:26987200-27017200 Weak transcription Fetal Muscle Trunk muscle
23 chr9:26987200-27023800 Weak transcription HSMMtube muscle
24 chr9:26987400-27019000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr9:26987400-27024000 Weak transcription Aorta Aorta
26 chr9:26991400-27017800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr9:26991600-27016200 Weak transcription Primary hematopoietic stem cells blood
28 chr9:26991600-27017400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr9:26991800-27058000 Weak transcription NHDF-Ad bronchial
30 chr9:26992800-27017200 Weak transcription Fetal Stomach stomach
31 chr9:27003000-27016200 Weak transcription Spleen Spleen
32 chr9:27004000-27023800 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr9:27005200-27024000 Weak transcription Rectal Smooth Muscle rectum
34 chr9:27005800-27024000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr9:27006400-27024000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr9:27006600-27023800 Weak transcription Colonic Mucosa Colon
37 chr9:27006600-27024200 Weak transcription H1 Cell Line embryonic stem cell
38 chr9:27006800-27017400 Weak transcription HMEC breast
39 chr9:27008200-27017400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr9:27008600-27022000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr9:27008600-27023800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr9:27009200-27017200 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr9:27009200-27019000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr9:27009400-27023800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr9:27009600-27016400 Weak transcription Primary B cells from cord blood blood
46 chr9:27009800-27023800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr9:27009800-27070000 Weak transcription Psoas Muscle Psoas
48 chr9:27010000-27017400 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr9:27010200-27016200 Weak transcription Primary T cells fromperipheralblood blood
50 chr9:27010600-27023800 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015