Variant report
| Variant | rs1234820 |
|---|---|
| Chromosome Location | chr12:48106488-48106489 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48100000-48109200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr12:48100000-48111200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr12:48100600-48106800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 4 | chr12:48100600-48108800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 5 | chr12:48100600-48109000 | Weak transcription | Aorta | Aorta |
| 6 | chr12:48100600-48109000 | Weak transcription | Lung | lung |
| 7 | chr12:48100800-48106800 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr12:48100800-48108800 | Weak transcription | Brain Hippocampus Middle | brain |
| 9 | chr12:48100800-48108800 | Weak transcription | Right Ventricle | heart |
| 10 | chr12:48100800-48109400 | Weak transcription | HSMM | muscle |
| 11 | chr12:48101000-48108800 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr12:48101000-48108800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 13 | chr12:48101000-48108800 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr12:48101000-48108800 | Weak transcription | Fetal Lung | lung |
| 15 | chr12:48101000-48108800 | Weak transcription | Fetal Muscle Leg | muscle |
| 16 | chr12:48101000-48109000 | Weak transcription | Fetal Heart | heart |
| 17 | chr12:48101000-48109200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 18 | chr12:48101000-48109200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr12:48101200-48109200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 20 | chr12:48101400-48108000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 21 | chr12:48101400-48108800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 22 | chr12:48101400-48108800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 23 | chr12:48101400-48109600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 24 | chr12:48101400-48111000 | Weak transcription | Colonic Mucosa | Colon |
| 25 | chr12:48101400-48111200 | Weak transcription | Small Intestine | intestine |
| 26 | chr12:48101800-48111200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 27 | chr12:48102000-48109200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 28 | chr12:48102200-48108200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr12:48102200-48108200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 30 | chr12:48102200-48108800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 31 | chr12:48102200-48108800 | Weak transcription | Spleen | Spleen |
| 32 | chr12:48102200-48109000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 33 | chr12:48102400-48108800 | Weak transcription | Liver | Liver |
| 34 | chr12:48102800-48125000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 35 | chr12:48103000-48109200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 36 | chr12:48103000-48109400 | Weak transcription | Primary T cells from cord blood | blood |
| 37 | chr12:48103200-48109000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 38 | chr12:48103200-48109000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 39 | chr12:48103200-48111200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 40 | chr12:48103400-48109000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 41 | chr12:48103400-48111000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 42 | chr12:48103600-48108600 | Weak transcription | Adipose Nuclei | Adipose |
| 43 | chr12:48103600-48109000 | Strong transcription | Placenta | Placenta |
| 44 | chr12:48103800-48109000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr12:48103800-48109200 | Weak transcription | K562 | blood |
| 46 | chr12:48104000-48109000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 47 | chr12:48104400-48108800 | Weak transcription | GM12878-XiMat | blood |
| 48 | chr12:48104400-48109000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 49 | chr12:48104600-48109000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 50 | chr12:48104600-48109000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
