The 2.0 version of rSNPBase

Variant report

Variant rs12348997
Chromosome Location chr9:15273466-15273467
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:15238400-15275400 Weak transcription Fetal Intestine Large intestine
2 chr9:15240600-15275400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr9:15241200-15286200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr9:15243000-15293400 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr9:15249600-15276200 Weak transcription Fetal Kidney kidney
6 chr9:15249800-15276200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr9:15250200-15288200 Weak transcription Fetal Stomach stomach
8 chr9:15251400-15273600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr9:15253800-15286400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr9:15254000-15293000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr9:15254200-15275400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr9:15254200-15276600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr9:15254200-15293000 Weak transcription NHEK skin
14 chr9:15254200-15295600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr9:15257000-15277800 Weak transcription Fetal Lung lung
16 chr9:15257200-15273600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr9:15257400-15275200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr9:15259200-15293400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr9:15260600-15283000 Weak transcription Colon Smooth Muscle Colon
20 chr9:15261800-15279200 Weak transcription Ovary ovary
21 chr9:15263000-15276200 Weak transcription Duodenum Mucosa Duodenum
22 chr9:15263800-15283000 Weak transcription Aorta Aorta
23 chr9:15264200-15285800 Weak transcription Primary hematopoietic stem cells blood
24 chr9:15266000-15273600 Weak transcription HepG2 liver
25 chr9:15268800-15277400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr9:15269000-15274000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr9:15271400-15273600 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr9:15271600-15273800 Strong transcription Fetal Intestine Small intestine
29 chr9:15271600-15274600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr9:15272000-15273600 Strong transcription Primary T cells from cord blood blood
31 chr9:15272000-15274400 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr9:15272200-15273800 Enhancers Lung lung
33 chr9:15272200-15276200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr9:15272200-15276400 Weak transcription Left Ventricle heart
35 chr9:15272800-15273800 Genic enhancers Primary T cells fromperipheralblood blood
36 chr9:15273000-15274000 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr9:15273000-15275600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr9:15273000-15276200 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr9:15273400-15273600 Enhancers Primary T helper cells fromperipheralblood blood
40 chr9:15273400-15273600 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr9:15273400-15273800 Enhancers Esophagus oesophagus
42 chr9:15273400-15274000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr9:15273400-15274000 Enhancers Gastric stomach
44 chr9:15273400-15274000 Enhancers Stomach Mucosa stomach

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Last update: Aug 31, 2015