Variant report

Variant rs12352556
Chromosome Location chr9:104033534-104033535
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:104031400-104034000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr9:104031600-104033800 Active TSS Brain Substantia Nigra brain
3 chr9:104031600-104034200 Active TSS Brain Hippocampus Middle brain
4 chr9:104031600-104034800 Active TSS Brain Inferior Temporal Lobe brain
5 chr9:104031800-104033600 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr9:104031800-104033800 Enhancers HUES64 Cell Line embryonic stem cell
7 chr9:104031800-104033800 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr9:104031800-104034000 Enhancers H1 Cell Line embryonic stem cell
9 chr9:104031800-104034000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr9:104031800-104034000 Enhancers HUES6 Cell Line embryonic stem cell
11 chr9:104031800-104034000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr9:104031800-104034000 Active TSS Brain Angular Gyrus brain
13 chr9:104031800-104034000 Active TSS Brain Anterior Caudate brain
14 chr9:104031800-104034000 Active TSS Brain Cingulate Gyrus brain
15 chr9:104032000-104036600 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr9:104032200-104033600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:104032400-104037000 Weak transcription HepG2 liver
18 chr9:104032400-104037600 Weak transcription Fetal Brain Male brain
19 chr9:104032400-104037800 Weak transcription Fetal Brain Female brain
20 chr9:104032400-104040800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr9:104032400-104042000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr9:104032800-104034200 Enhancers HUES48 Cell Line embryonic stem cell
23 chr9:104033000-104033800 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr9:104033000-104037400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr9:104033000-104037800 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr9:104033400-104033600 Enhancers Esophagus oesophagus
27 chr9:104033400-104034000 Enhancers H9 Cell Line embryonic stem cell
28 chr9:104033400-104034000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell

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