Variant report

Variant rs12402714
Chromosome Location chr1:145555087-145555088
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145549800-145558200 Weak transcription Pancreas Pancrea
2 chr1:145549800-145561800 Weak transcription Right Atrium heart
3 chr1:145550200-145555200 Weak transcription Esophagus oesophagus
4 chr1:145550200-145556600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:145550200-145562200 Weak transcription Right Ventricle heart
6 chr1:145550200-145562400 Weak transcription Brain Angular Gyrus brain
7 chr1:145550400-145556200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:145550400-145562400 Weak transcription Brain Hippocampus Middle brain
9 chr1:145550800-145562000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:145551000-145555800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:145551400-145561800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:145551600-145556000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:145553800-145555400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:145554000-145555400 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr1:145554000-145555600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:145554200-145555400 Enhancers Brain Germinal Matrix brain
17 chr1:145554200-145557600 Enhancers Placenta Amnion Placenta Amnion
18 chr1:145554400-145555600 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:145554400-145555600 Enhancers HUES64 Cell Line embryonic stem cell
20 chr1:145554400-145555600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:145554400-145555800 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr1:145554400-145558200 Enhancers Stomach Mucosa stomach
23 chr1:145554600-145555400 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr1:145554600-145555400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:145554600-145555400 Enhancers NHEK skin
26 chr1:145554600-145555600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:145554600-145555600 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:145554600-145555600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:145554600-145555800 Enhancers H9 Cell Line embryonic stem cell
30 chr1:145554800-145555200 Enhancers HUES48 Cell Line embryonic stem cell
31 chr1:145554800-145555200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
32 chr1:145554800-145555200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:145554800-145555400 Flanking Active TSS K562 blood
34 chr1:145554800-145555600 Enhancers HUES6 Cell Line embryonic stem cell
35 chr1:145554800-145555800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr1:145554800-145556000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:145555000-145555200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
38 chr1:145555000-145555200 Bivalent Enhancer HepG2 liver
39 chr1:145555000-145555400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
40 chr1:145555000-145555400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:145555000-145557000 Enhancers HMEC breast

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