Variant report

Variant	rs1241074
Chromosome Location	chr6:143652937-143652938
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143646794..143649528-chr6:143650260..143652968,2	K562	blood:

Variant related genes	Relation type
ENSG00000216642	Chromatin interaction

rs_ID	r²[population]
rs1241004	1.00[AFR][1000 genomes]
rs1241005	1.00[AMR][1000 genomes]
rs1424933	1.00[AFR][1000 genomes]
rs161055	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7768795	1.00[AMR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143643800-143653600	Weak transcription	Ovary	ovary
3	chr6:143643800-143661200	Weak transcription	Aorta	Aorta
4	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
5	chr6:143645200-143656800	Weak transcription	Psoas Muscle	Psoas
6	chr6:143645800-143653600	Weak transcription	Fetal Stomach	stomach
7	chr6:143645800-143655600	Weak transcription	Fetal Brain Female	brain
8	chr6:143646000-143664000	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr6:143647200-143654200	Weak transcription	HepG2	liver
10	chr6:143647200-143657400	Weak transcription	NHLF	lung
11	chr6:143647400-143654000	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr6:143647400-143658200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr6:143647600-143654000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:143648600-143654200	Weak transcription	Liver	Liver
15	chr6:143650400-143654800	Weak transcription	Fetal Intestine Large	intestine
16	chr6:143650600-143653200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr6:143650800-143657200	Weak transcription	NH-A	brain
18	chr6:143650800-143657400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr6:143650800-143657400	Weak transcription	NHDF-Ad	bronchial
20	chr6:143652200-143653400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr6:143652200-143653400	Weak transcription	HMEC	breast
22	chr6:143652200-143653600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr6:143652400-143653400	Weak transcription	NHEK	skin
24	chr6:143652400-143662200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr6:143652600-143653200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr6:143652800-143656400	Weak transcription	Right Ventricle	heart
27	chr6:143652800-143664000	Weak transcription	Duodenum Mucosa	Duodenum

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